| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1190 |
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| Symbol | |
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| ID | 5711958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1227261 |
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| End bp | 1228403 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267101 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001532533 |
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| Protein GI | 159043739 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.504268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.434542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCC GATACGACCG CTATATCCTT GGCCGCCTGA TGGTCACCTT CGGGTTCTTC
ACCCTGATCA TCGTGCTGAT CTACTGGATC AACCGGTCGA TCCGGCTGTT CGAGCGGCTG
TCGGGGGACG GCCAGGGGCT GGCGCTGTTT GCGCAGCTTT CCTTGTTGTC GCTGCCCTAC
CTGATCTACC TGATGCTGCC GCTGGCGGCC TTCGCCTCGG CCGTGAGCAC CGGCAACCGG
ATGGGCTCGG ACAGCGAGAC GGTGGCGCTG CAGGCGGCGG GGATCAGCGC CTTCCGGATC
GTGCGCCCGG CCTTGTATAT GGGGGTGATG GCGGCGGCGC TGATGCTGCT TCTGGCGCAT
CTGCTGGTGC CGATGTCCCG GGTGGCCATC GCCGATCTCG AGGAACAGCT GGCCGACGAG
GTGTCGGCGC GGCTGCTGGA GCCGGGCAAG TTCCAGTCGC CCATCGACGG GGTGACGGTT
TTCGTGGCCG AGATCACCGG CGAAGGCGTG CTCAGCAAGG TGCTTCTCTC GGACCAGCGC
GACCCGGCCG AAGAGGTGAT CTACACCGCC AACCAGGCTC TGCTGGTGCG TAGCGACACG
GGCCCGCAGT TGGTGATGAT CTCGGGGCTG GCACAGTTCC TGCGCGCCGA TGGCACGCTC
AGCACCCTGC AATTCGAGGA TTTCGCCCTT GGTCTGGGCG AGGTCGAAGT GCCCGAGGAC
CGGGTGTTGC GCGACCTGCG GGGCTGGGAC ACCGCGCGGC TCCTGCGGGC GGATCCGGCG
GACCTGGAAA GCGTGGGCAA GAGCCGTGGG GCGTTTCTCA GCGAAGCGCA CCGGCGGCTC
GCCAACCCGG CCCTGGCGAT CAGCACCGCC CTTCTCGGCT TCAGCGCGCT GCTGGTCGGC
GGGTTCAGCC GCTTCGGCTT CTGGCAGCAG GTGGCGGGCG CGATCCTTGC GCTGATCGTG
ATCCAGCTGT CGGTGAACAT GTCCGAAGAG ATCGCGCAAT CCGACGCCGC GGCCTGGCCC
GTGCTTTATG CGCCCGTGGC CTTGGCGGCG GGGCTGGTGC TGGTGCTGCT CTATGTCTCC
GACCACCCGA TCCGGCGGCG GCTCAAGCCG GTGCCCGATC CCGGGGCGGA GCCCGCGCCA
TGA
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| Protein sequence | MLARYDRYIL GRLMVTFGFF TLIIVLIYWI NRSIRLFERL SGDGQGLALF AQLSLLSLPY
LIYLMLPLAA FASAVSTGNR MGSDSETVAL QAAGISAFRI VRPALYMGVM AAALMLLLAH
LLVPMSRVAI ADLEEQLADE VSARLLEPGK FQSPIDGVTV FVAEITGEGV LSKVLLSDQR
DPAEEVIYTA NQALLVRSDT GPQLVMISGL AQFLRADGTL STLQFEDFAL GLGEVEVPED
RVLRDLRGWD TARLLRADPA DLESVGKSRG AFLSEAHRRL ANPALAISTA LLGFSALLVG
GFSRFGFWQQ VAGAILALIV IQLSVNMSEE IAQSDAAAWP VLYAPVALAA GLVLVLLYVS
DHPIRRRLKP VPDPGAEPAP
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