Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1170 |
Symbol | |
ID | 5711938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1200611 |
End bp | 1201234 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641267081 |
Product | methyltransferase type 11 |
Protein accession | YP_001532513 |
Protein GI | 159043719 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0322636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCCGC CGCCGTCTCC GACCCCCGAA CAGGTGCTTT CGACCTATGG CCGCGTGGCC GATGATTTCG CGCGGATGCG CAACACATCG CTGTTCGAGC TGCCAATGCT GCAGGCGGTG CAGGCCCATG CGCCGGGGCG CGACCTGCTC GATCTGGGCT GCGGGCCGGG CGCGCCGCTG GCGCGGTGGC TGTCGTGGCG CGGGTTTCGG GTGACGGGCG TGGATGGCGC AGCGGGGATG CTGCCGCATT TCCGCCGCAG CACTCGGGGC GCGCGGGCCC TTCGGGCGGA TATGCGCCAC CTGGCCCTGG GGCAGCGGTT CGATGCGCTC CTGGCCTGGG ACAGTTTCTT TCACCTGTCG CTGCGGGACC AGGCGCGGAT GTTTCCGGTC TTTGCCCGCC ATGCGCGGCG CGGCGCGGTG CTGGTGTTTT CGTCGGGCCC CGCGCGCGGA GTGGCTTTCG GTCGAGCGGC GGGGGCGCCG ATCTTCCATG CCAGCCACGC GCCGCTGGCC TATCGGCGGA TGCTACGGCA GGCCGGGTTC ACGGTTCTGC GTTTCTCACC CGAGGATCCG GCGCTGGACC GGCATAGCTG GTGGCTCTGT CGGCGTCTCT CGCGCGCTCA CTGA
|
Protein sequence | MTPPPSPTPE QVLSTYGRVA DDFARMRNTS LFELPMLQAV QAHAPGRDLL DLGCGPGAPL ARWLSWRGFR VTGVDGAAGM LPHFRRSTRG ARALRADMRH LALGQRFDAL LAWDSFFHLS LRDQARMFPV FARHARRGAV LVFSSGPARG VAFGRAAGAP IFHASHAPLA YRRMLRQAGF TVLRFSPEDP ALDRHSWWLC RRLSRAH
|
| |