| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1161 |
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| Symbol | |
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| ID | 5711929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1187053 |
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| End bp | 1188213 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267072 |
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| Product | amidohydrolase |
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| Protein accession | YP_001532504 |
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| Protein GI | 159043710 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTG TCAATCGCAT CGCGGAATAC GGACCCGACA TGACCGCCTG GCGGCAGGCG
CTGCATCGCG CGCCGGAGCT GGGTTTCGAG TGCCACAAGA CCGCGCGCTA CCTGATCGCG
CGGCTGCGGG CCTTCGGGGT GGACGAGGTG CATGACCGGA TCGCGACCAG CGGGGTCGTG
GCCCTGATCC GGGGCGGCGG ACCGGGGCCG GTGATCGGGC TGCGCGCGGA TATGGATGCG
CTGCCGATCG TCGAGGAAAC CGGGGTCGCC TATGCCTCGG AAACCGAGGG GGTGATGCAT
GCCTGCGGCC ATGACGGGCA TATGGTCATG CTGCTTGGCG CCGCGCGCTA CCTGGCCGAG
ACGCGGAATT TCGCGGGCAC GGTGGCGATC ATCTTCCAGC CCGCCGAAGA ACATGGCGGT
GGCGCGCAGG TGATGTGCGA CGAGGGGCTG ATGGAGCGGT TCGGGATCGA GCATGTCTAT
GCCCTGCACA ACGCGCCGGG GATCGCCGAG GGGCATTTCC TGACCACGCG CGGGCCGATC
ATGGCCGCGG TGGACACGTT TCACATCCAT ATCAAGGGGC GGGGCGGGCA CGCGGCCATG
CCGCACGAGA CCGCCGATCC GATCATGGCG GCGGTGGGCA TCGCCCAGGC GCTGCAGACC
ATCGTCAGCC GCAACCATAT CGCCACGGAC GAGCTGGTGC TGTCGGTCAC CCAGATCCAC
ACCGGCACCG CCGATAACGT GGTGCCCGAC ACCGCCTATA TCTGCGGCAC GGTGCGCAGT
TTCGACCCCG CCGTGCAGGC CATGGTCATG CGCCGGATGG AGCAGATCGT AGCCGGGCAG
GCCGCCAGTT TCGACGTCAT GGCGGAGCTG GATTACGAGA AGGGCTATCC GCCCACGGTC
AACACCGCCG ACGAGGTCGC GCTGGCTGCC CGCGCGGCCA GCGACGTGGT GGGGGACCGG
GCGGTGGATA CCGCCTCGGG GCGGCAGATG GGGGCGGAGG ATTTCGCCTA CATGCTCCAG
GCGCGGCCGG GGGCCTACCT GTTTCTGGGG CAGGGGGAGG GGGCCGGGCT GCACCACCCT
GCCTATGATT TCAACGACCG GATCGCGCCG ATCGGCGCCA GTTTCTTCGC CCGCCTGGTG
GAGCAGGCCC AACCGCTCTG A
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| Protein sequence | MAVVNRIAEY GPDMTAWRQA LHRAPELGFE CHKTARYLIA RLRAFGVDEV HDRIATSGVV
ALIRGGGPGP VIGLRADMDA LPIVEETGVA YASETEGVMH ACGHDGHMVM LLGAARYLAE
TRNFAGTVAI IFQPAEEHGG GAQVMCDEGL MERFGIEHVY ALHNAPGIAE GHFLTTRGPI
MAAVDTFHIH IKGRGGHAAM PHETADPIMA AVGIAQALQT IVSRNHIATD ELVLSVTQIH
TGTADNVVPD TAYICGTVRS FDPAVQAMVM RRMEQIVAGQ AASFDVMAEL DYEKGYPPTV
NTADEVALAA RAASDVVGDR AVDTASGRQM GAEDFAYMLQ ARPGAYLFLG QGEGAGLHHP
AYDFNDRIAP IGASFFARLV EQAQPL
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