| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1121 |
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| Symbol | |
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| ID | 5711089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1147479 |
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| End bp | 1147988 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267032 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001532464 |
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| Protein GI | 159043670 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.283506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.89566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGA CCGTTTCCCA AGCTCTCTGG TTTCTGCCGT TCATCTTGCC GATCTGCCTG
TTCGTGGCCT GGAGCGACAT GAAATTCATG CGCATCCCCA ACAGATCGGT TCTGCTCCTG
CTGGGAATGT TCGCGATCGT GGGCCTCTTG GCCCTGCCGC TGCTGGATTA CGCATGGCGA
TGGGTCCATG TGATCGCCGT GCTGGCGGTC GGCTTCGTGA TGTCCAGTGC GGGCCTCGTT
GGGGCGGGGG ACGCGAAGTT CGCCGCCGCC ATGGCCCCGT TCGTGGCGCT GCAGGACGCG
CTGTTGGTGG TTGTGCTGTT CTCCGCGATC CTGCTCGGCG CCTTCGCGAC CCATCGCCTC
GCGCGGATGC TGCCTGCGGT CCGGCGACTG ACCCCAGATT GGGAAAGCTG GACGCGCAAG
CGCGACTTTC CCATGGGGCT CGCTCTGAGC GGGACGCTGA TTTTCTACTT TTTGCTGCCT
GTTCTTCTTC CGCAGGTCAC GCTTTCTTAA
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| Protein sequence | MAVTVSQALW FLPFILPICL FVAWSDMKFM RIPNRSVLLL LGMFAIVGLL ALPLLDYAWR
WVHVIAVLAV GFVMSSAGLV GAGDAKFAAA MAPFVALQDA LLVVVLFSAI LLGAFATHRL
ARMLPAVRRL TPDWESWTRK RDFPMGLALS GTLIFYFLLP VLLPQVTLS
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