Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0727 |
Symbol | |
ID | 5711162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 735721 |
End bp | 736650 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641266635 |
Product | transcriptional regulator |
Protein accession | YP_001532073 |
Protein GI | 159043279 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.849989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGCC CCACCCTCAG ACAGTTGCAA TTCCTCGTCG CGATCGAGGA AACGGCGCAT TTTCGGCGCG CCGCCGAACG GGTGGGCGTG ACCCAACCGT CCCTGAGCGC ACAGATCCAG AACCTGGAAG ACACCTTGGG CGTTGCCCTG GTGGAGCGTG GGCGCGGCGG CGTGCGCCTG ACCCAGGTCG GCCGGGAGGT CGTGTTGCGC GCCCGGCGCA TCCTCGACGA TGTCCAGAGC CTGGTCGATT TCGCGGGCAC CGCGCGCGAC GGGGTGGTCG GCACCATCCG GCTGGGGGCC AAGGCAACGC TGGGGCCCTA CCTGCTGCCC CATGTGGTCG GCGCGCTCCA CGCGGCGCAC CCGGACCTGC GGATCTACAT TCGCGAGGAT GCGCCACGGC TGCTGGAACA GGACCTCGCG CGCGGCGAGC ATGACGTGAT CCTGACGCAG CTGCCGGTGA CCGGGGCCGA TTACACCACC GCGCGGCTGT TCCGCGAACC GTTGCTGCTG GCCCTGCCCG CCGATCACCC CCTGCTCGAC AAGGAGGTGC TGCGGCCGCG GGATCTGGCG GGCGAGCAGG TGCTGAGCCT CAGCCCCGCC TACCACCTGC ACGACCAGAT CACCGCGATC TGCCAGCAGA CCGGCGCCCA GCTTGCGCGC GACTACGAGG GCACATCGCT GGATGCCCTG CGCCAGATGG TGGGAATGGG AATGGGGATC ACGTTTCTAC CCGCGCTCTA TGTCCGGTCG GAGATCGAGG GCCGCGGGGC GGAGGTGGTG GTCCGCCGTC TCAGCGGCGC CCCCATCGCG CGGTCTGTTG GCCTTGTCTG GCGCACCCGG GCGGGACGCA CCGGAGCGAA TTTACAAATC GCGCAGGTGA TCCGCGACGT GGTGCGGGCG CGCTGGCCGG AGCTGGTGGT CGAAAGCTGA
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Protein sequence | MAGPTLRQLQ FLVAIEETAH FRRAAERVGV TQPSLSAQIQ NLEDTLGVAL VERGRGGVRL TQVGREVVLR ARRILDDVQS LVDFAGTARD GVVGTIRLGA KATLGPYLLP HVVGALHAAH PDLRIYIRED APRLLEQDLA RGEHDVILTQ LPVTGADYTT ARLFREPLLL ALPADHPLLD KEVLRPRDLA GEQVLSLSPA YHLHDQITAI CQQTGAQLAR DYEGTSLDAL RQMVGMGMGI TFLPALYVRS EIEGRGAEVV VRRLSGAPIA RSVGLVWRTR AGRTGANLQI AQVIRDVVRA RWPELVVES
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