Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0653 |
Symbol | pheA2 |
ID | 5711489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 655248 |
End bp | 656090 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641266562 |
Product | prephenate dehydratase |
Protein accession | YP_001532000 |
Protein GI | 159043206 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATTGA AAATCGCGTT CCAGGGAGAA CCGGGCGCCT ACTCGCACCA GGCCTGCCAC GACGCCCGCC CCGATGCGGA GGCCGTGCCC TGCCGCACCT TCGAGGATGT GTTCGCCGCC GTGCATGACG GCAGTTGCGA TCTGGGCATG CTCCCGGTGG AGAACTCGAC CTATGGCCGC GTGGCCGATA TCCACCGGCT GCTGCCCGAA AGCGGCCTGC ATATCATCGA AGAAGCCTTC GTGCGCGTGC ATATCAACCT GCTCGCCGTG CCAGGCGCCA AGCTCGGCGA TATCCGCACC GCCCAGAGCC ACACGGTCCT GCTGGGCCAG TGCCGGTCCT TCCTGCGCGC CCATGACATC CAGCCCGTGA CCGGGGCCGA TACGGCGGGC TCGGCCATGC ATGTCGCGCA GGAGGGCAAC CCGGCCCATG CCGCGCTGGC CTCGGAACTG GCCGGCGAGA TCTACGGGCT CGACGTGCTG GCCCGCCATA TCGAGGACCA GGACAACAAC ACCACCCGCT TCCTGATCAT GACGCCGGAG CTGGACCTCA CCCGGCGGGG GTCCGGCAAG ATGATCACCT CCTTCGTGTT CCAGGTCCGT AACATCCCCG CCGCCCTCTA CAAGGCGATG GGCGGGTTCG CGACCAACGG CGTGAACATG ACCAAGCTGG AAAGCTACAT GGTCGGCGGG TCCTTCACCG CGACCCAGTT CTACGCCGAT ATCGAAGGCC ACCCGGACGA CGCCAATGTC CGGCGGGCGC TCGACGAGCT AGGCTATTTC ACCTCGCAGC TGGAAATCCT CGGGGTCTAC CCGGCCGACC CGCGGCGCGA CGAGACCGCC TGA
|
Protein sequence | MTLKIAFQGE PGAYSHQACH DARPDAEAVP CRTFEDVFAA VHDGSCDLGM LPVENSTYGR VADIHRLLPE SGLHIIEEAF VRVHINLLAV PGAKLGDIRT AQSHTVLLGQ CRSFLRAHDI QPVTGADTAG SAMHVAQEGN PAHAALASEL AGEIYGLDVL ARHIEDQDNN TTRFLIMTPE LDLTRRGSGK MITSFVFQVR NIPAALYKAM GGFATNGVNM TKLESYMVGG SFTATQFYAD IEGHPDDANV RRALDELGYF TSQLEILGVY PADPRRDETA
|
| |