| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0221 |
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| Symbol | parC |
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| ID | 5712146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 217806 |
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| End bp | 220139 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641266116 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001531571 |
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| Protein GI | 159042777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGACAGACGA CCCCAACATG GACGATCCGG ACGCCGAAGA GCCGGGCGCG
GCCCAGACCT CCGAGCCCCT GCGCCGCGCG ATCGGGGCGC GGTACCTGCA ATATGCGCTC
AGCACGATCA TGCACCGGGC ATTGCCCGAT GCCCGCGATG GCCTCAAACC CGTGCACCGG
CGGATCCTCT ATGCCATGCG CGAGCTGCGG CTGAGCGCCA CCGGGGGGTT CCGAAAATCC
GCCAAGATCT CCGGCGATGT AATGGGCAAC TACCACCCCC ACGGGGATGC CGCGATCTAT
GACGCGATGG CCCGGCTGGC GCAGGATTTC AACGTCCGCT ACCCGCTGGT GGATGGGCAG
GGGAACTTCG GCAATATCGA TGGCGATAAT CCCGCCGCCT CTCGTTACAC CGAGGCCCGC
CTGACCGCCG CCGCCGAGGC GTTGATGGAA GGGCTGGCCG AGAACGCGGT CGATTTCCGC
GACAACTATG ATGGCACCCT GACCGAGCCC GAAGTGCTGC CCGCGGCGTT TCCCAACCTG
CTGGCCAACG GGTCGAGCGG GATTGCCGTG GGAATGGCGA CCAACATCCC GCCCCACAAC
CTGCATGAGC TGATCGATGG TTGCCTGCAC CTGATCCGCG CGCCCAACGC CCGCGACGAG
ACCCTGTTGG AGATGATCCC CGGCCCCGAT TTCCCTACCG GCGGCGTGAT CGTAGAGCCG
AAGGAGAGCA TCGCCCAGGC CTATGCCACC GGGCGCGGGG CGTTCCGGCT GCGCGCACGC
TGGGCGCGCG AGGATCTGGG CCGGGGTCAG TGGCAGATCG TGATTACCGA GATCCCCTAC
CAGGTCCAGA AATCCAAGCT GATCGAGAAG ATCGCCGACC TGATCCAGAC CAAGAAGGTG
CCGATCCTCG CCGACATCCG CGACGAGAGT GCCGATGACG TCCGCATCAT CTTGGAGCCA
CGCTCCAAGA ACGTGGACCC GGAGGTTCTG ATGGGCACGC TCTTTCGCCT GTCGGAGCTG
GAGACGCGAT TCTCGCTGAA CATGAACGTG CTGATCGACG GGCGCACGCC CAAGGTCTGC
TCCCTGCGCG AGGTGCTGCG TGCCTTTCTC GATCACCGCC GCGACGTGCT CGGGCGCCGG
TCGCGTCACC GGCTGGCCAA GATCGACCAC CGGCTCGAAG TGCTCGAAGG CTTCCTCGTG
GCCTTCCTCA ATCTCGACCG GGTGATCGAC ATCATCCGCT ACGACGAGGA TCCGAAGGCC
GCGCTGATGC GCGAGGACTG GAGCCTGAAG CATGTCCGCG CCACGGACGA GGCCGACTAC
AAGACCCCCG CGCCGGGCGA GGGCGAGTTG ACCGAGGTGC AGGCCGAGGC AATCCTCAAC
ATGCGCCTGC GCTCGCTCCG GCGGCTGGAG GAGATGGAGC TGATCTCCGA GCGTGACGCG
CTGATGGCCG AGCGGGCAGA GCTCGAAGAC CTTCTGGCCG ACGAGGCCCT GCAATGGGCG
CGCATCGCCG ACGAGCTGCG CGAGGTGCGC AAGCAGTTCG GCAAGGGCAC GGCCCTGGGC
AAGCGCCGCA CGGATTTCGC CGTGGCGACC GAGATGGCCG AGGTCAGCCT TGAGGACATG
ATCGAACGCG AACCGATCAC GGTGGTCTGC TCGAAAATGG GCTGGATCCG CGCGATGAAG
GGCCATGTGG CGCTCGATCA GGCGCTGAAG TTCAAGGATG GCGACGAGGG TCGGTTCATC
TTCCACGCCG AGACCACCGA CAAGCTCCTG GCCTTCGGCG CCAATGGCCG GTTCTACACC
CTGTCCTGCG CGGCCCTGCC CGGCGGGCGG GGCATGGGCG AGCCTATCCG GCTGATGGTG
GATTTGCCGA ACGAGGCCGA ACTGGTGGAC CTGTTTCTGC ACGTGCCCGG GCGCCGGCTG
ATCGTGGCCT CGGATGCGGG CGACGGTTTC ATCGTGCCCG AGACAGAGGT GCTGGCCCAG
ACCCGCACCG GCAAGCAGGT GCTCAACGTG AAATCCCCCC ACCGCGCGCT GCTGGCCCGG
CCGGTGGCGG GCGATGCCAT CGCGGCGGTC GGCGAGAACC GCAAGCTGCT GGTCTTTGCC
GCCGACGAGT TGCCCGAGAT GGGCCGCGGC AAGGGGGTGC GCTTGCAGAA ATACAAGGAT
GGCGGACTAT CGGACCTGCG CAGTTTTGAC CGGGCGCAGG GGCTGCAATG GCTGGATGCG
GGCGGGCGCA CCCGCACCGT GGCCGACCCG GAACTGGCCG AATGGTCGGG CAAACGGGCG
GGCACGGGCC GGATGGCGCC GCGCGGCTTT CCGCGGGACA ACAAGTTCAC CTGA
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| Protein sequence | MSDTTDDPNM DDPDAEEPGA AQTSEPLRRA IGARYLQYAL STIMHRALPD ARDGLKPVHR
RILYAMRELR LSATGGFRKS AKISGDVMGN YHPHGDAAIY DAMARLAQDF NVRYPLVDGQ
GNFGNIDGDN PAASRYTEAR LTAAAEALME GLAENAVDFR DNYDGTLTEP EVLPAAFPNL
LANGSSGIAV GMATNIPPHN LHELIDGCLH LIRAPNARDE TLLEMIPGPD FPTGGVIVEP
KESIAQAYAT GRGAFRLRAR WAREDLGRGQ WQIVITEIPY QVQKSKLIEK IADLIQTKKV
PILADIRDES ADDVRIILEP RSKNVDPEVL MGTLFRLSEL ETRFSLNMNV LIDGRTPKVC
SLREVLRAFL DHRRDVLGRR SRHRLAKIDH RLEVLEGFLV AFLNLDRVID IIRYDEDPKA
ALMREDWSLK HVRATDEADY KTPAPGEGEL TEVQAEAILN MRLRSLRRLE EMELISERDA
LMAERAELED LLADEALQWA RIADELREVR KQFGKGTALG KRRTDFAVAT EMAEVSLEDM
IEREPITVVC SKMGWIRAMK GHVALDQALK FKDGDEGRFI FHAETTDKLL AFGANGRFYT
LSCAALPGGR GMGEPIRLMV DLPNEAELVD LFLHVPGRRL IVASDAGDGF IVPETEVLAQ
TRTGKQVLNV KSPHRALLAR PVAGDAIAAV GENRKLLVFA ADELPEMGRG KGVRLQKYKD
GGLSDLRSFD RAQGLQWLDA GGRTRTVADP ELAEWSGKRA GTGRMAPRGF PRDNKFT
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