Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_0084 |
Symbol | |
ID | 5711707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 83135 |
End bp | 83662 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641265979 |
Product | hypothetical protein |
Protein accession | YP_001531434 |
Protein GI | 159042640 |
COG category | [S] Function unknown |
COG ID | [COG3247] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.105076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.179004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATGGG CCCTGCTTGG GCTGCTCTCG CTGGTCTGCG GCGTGATCGT ACTGGGCAAC ACCGTGCTTG CCTCGATCGC GGTCACCGGC CTGACCGGGG CGCTTTTCCT GATCGCAGGG GGCGCGCAGA TCGTCGGCGG TCTCGGCGAA GAGGGCTTCG GCAGCAAGGC GTTCTCGATC GGCATGGGGG TGCTCGCGGC GTTCCTGGGC CTCTCCTTCC TGTTCAACCC GCTTCAGGGC GCGATTTCCC TCGCCCTGCT GATCACCATC CTGCTGGCGG TCAGCGGCGG CGCGCGGATC GTCTTTGCCT GGACCATGAA GCAGACCCAG TTCTTCTGGC CGATGCTGAT CTCCGGCGCT CTGTCGATCC TGCTGGCGGC TTACATCATG GCCAATTTCG CCACCGCCTC AGTGCAATTG CTGGGCGTGC TGCTGGGGGT CGAGTTGCTG TTCAATGGCA TGGGCTTCGT GGTGCTGGGC TTCTTCCTGC GCAGCCATCC CGAGCTGGCC AAACCGAAAA AAGACTAA
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Protein sequence | MKWALLGLLS LVCGVIVLGN TVLASIAVTG LTGALFLIAG GAQIVGGLGE EGFGSKAFSI GMGVLAAFLG LSFLFNPLQG AISLALLITI LLAVSGGARI VFAWTMKQTQ FFWPMLISGA LSILLAAYIM ANFATASVQL LGVLLGVELL FNGMGFVVLG FFLRSHPELA KPKKD
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