Gene Dshi_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0084 
Symbol 
ID5711707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp83135 
End bp83662 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID641265979 
Producthypothetical protein 
Protein accessionYP_001531434 
Protein GI159042640 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.105076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.179004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGG CCCTGCTTGG GCTGCTCTCG CTGGTCTGCG GCGTGATCGT ACTGGGCAAC 
ACCGTGCTTG CCTCGATCGC GGTCACCGGC CTGACCGGGG CGCTTTTCCT GATCGCAGGG
GGCGCGCAGA TCGTCGGCGG TCTCGGCGAA GAGGGCTTCG GCAGCAAGGC GTTCTCGATC
GGCATGGGGG TGCTCGCGGC GTTCCTGGGC CTCTCCTTCC TGTTCAACCC GCTTCAGGGC
GCGATTTCCC TCGCCCTGCT GATCACCATC CTGCTGGCGG TCAGCGGCGG CGCGCGGATC
GTCTTTGCCT GGACCATGAA GCAGACCCAG TTCTTCTGGC CGATGCTGAT CTCCGGCGCT
CTGTCGATCC TGCTGGCGGC TTACATCATG GCCAATTTCG CCACCGCCTC AGTGCAATTG
CTGGGCGTGC TGCTGGGGGT CGAGTTGCTG TTCAATGGCA TGGGCTTCGT GGTGCTGGGC
TTCTTCCTGC GCAGCCATCC CGAGCTGGCC AAACCGAAAA AAGACTAA
 
Protein sequence
MKWALLGLLS LVCGVIVLGN TVLASIAVTG LTGALFLIAG GAQIVGGLGE EGFGSKAFSI 
GMGVLAAFLG LSFLFNPLQG AISLALLITI LLAVSGGARI VFAWTMKQTQ FFWPMLISGA
LSILLAAYIM ANFATASVQL LGVLLGVELL FNGMGFVVLG FFLRSHPELA KPKKD