| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2308 |
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| Symbol | |
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| ID | 8420168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2622651 |
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| End bp | 2626340 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645038911 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_003199170 |
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| Protein GI | 258406428 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAA AAGCTTTTGA GAGCGTTGTG GAGGAACTAC GTGATCAGCC AATATTAGTA
GCAAATCGTG GAATTCCTGC AAGGCGCATT GCTCGTTCTA TATTAGAGGT TTTTCAGGCC
GTTCCAATCA TAACGGCAAC AGAGGAAGAT AAAACCGCTC CCTTTACCAC CGGTGCTCAA
GAATTGTTGC TCCTTGGGTC TAACCCCCAA GCGTATCTAG ATATAGATTT AATCATAAAC
AGGGCCAAGG CGCGCGGGGT CAAAGCGATC CACCCCGGCT GGGGGTTCGC CTCTGAAGAT
GAGGCCTTTC CGGAAAAATG CCGGGCCGCT GGCCTGGTGT TTATCGGTCC GCCTTCCAGA
CCGATGCATA TCCTGGGCAA CAAGGTCCAG GTCCGCAATC TGGCCAAAGA GCACGGGGTC
CCTGTCGTTC CGGGGTCTGA CGGTGCGGTG AGCATTGACG AGGCCCGCCG GATTGCCGAG
GACATCGATT TTCCGATCAT GCTCAAGGCT GAAGGCGGCG GCGGAGGGCG CGGCATTTAC
GAAGTCTACC AGCAAAGCGA ACTCGAACGC GCCTTTGCCA AAGCCTCCTC CCTGGCCCAA
GCCTCCTTTG GCAACCCCCG CCTGTATGTC GAAAAGCTCC TGACCTCGAT CCGGCACATC
GAAATCCAGG TCATCGCCGA CCAGCACGGG AATGTCTTCG CCTTTGACGA ACGCGACTGC
ACCGTTCAGC GCAATCACCA GAAGCTCGTC GAGATCACGC CCTCGCCCTG GCCGGTGATG
ACTGAGGAGT TGCGCGAACG GCTCAAGGAG TACTCCCGTC GCCTGGTCAG CGCTGTGGGC
TACCATTCCC TGGCCACCGT CGAATTCCTG GTGGACATGG AGGGCAATCC CTACCTGATC
GAGGTCAATA CCCGGCTTCA GGTGGAGCAC GGCATCACCG AGTGCCGCTA TGGCATCGAC
TTGGTCGAGG AACAGATAGC GGTGGCTTTT GGCGCCAAAC TCCGTCTGGA CGATGCCAAG
CCTTGTCCCG GGAACCACGC CTTGCAGGTG CGCATCAACT GCGAAGACCC GCAGGACGGT
TTCGCGCCCA ATGCCGGGCG CATCACCCGC TACCTCTCTC CAGGCGGACA GGGGGTCCGT
GTGGATTCCT GTCTTGCCGC CGGGTATGAA TTCCCTTCCC AGTACGATTC GGCAGCCTCC
CTGCTCATCG CCTACGGCCG GGACTGGAGC AAGGTCCTCG GGGTCATGGA GCGGGCTCTG
GGCGAATATG TCATTTCCGG GGTCAAAACG ACCATTTCCT TTCACCAGCG GATTATTGCC
AATCCGCAAT TCCGGTCCGG CGATTACGAT ACGACCTTTG TGGGCAAGAC GCCGCAATTG
CTCGAATACG TCAGCAAGGA GGCGGAAGCG CAGCGTTTGG GCCGACTGGT TTGCGAAATT
TCGGCCTACG GCCACAATCC CTTTGTCCAA CTCGGGGAAT ACCGGGGCCG ATCGGACAAG
CGCCTCGGTG CCCTGGACGT GGTCCAGCCG GAAGTCGATT TCGACGCCAT CGAATCGCCG
TATCCCCGGG GAGACCGTCA GGCCTTGCTC GATTATGTTC GGGATACTGA GCATGTCCAT
TTCACGGACA CCACGACCAG GGACATCACC CAGTCCAACA GTGGCAACCG GTTCCGCCTG
GCCGAGGACC GGCTTATCGG CCCCTATCTG GACAATTGCG GATTCTTCTC CTTGGAAAAC
GGTGGCGGGG CCCACTTCCA CGTGGCCATG CTGGCGAACA TGACCTATCC CTTCACCGAA
GCCAGGGAAT GGAACGAGTT CGCTCCCAAG ACCCCGAAGC AGATCCTGAT CCGGTCGACC
AACGTTCTGG GCTACAAGCC CCAGCCCAAA AATCTGATGC AGCGCACCGG GGAGATGATC
TGCGAGCATT ACGATATCAT CCGCTGTTTT GATTTTCTGA ACCATATCGA GAACATGCGG
CCCTTTGCCG AAGTGGTTGC CAATAGTCGA GGCAATGTTT TTGAGCCAGC CTTGTCCATA
ACTTGGGCGA AGGAGTTTGA TGTCGATCAC TATATGCAAG TTACTGAGTC TGTAGTTCGT
CTCATGGCAG ATGTGACAGG GACAAATACA TACCAGGCCA GCCGGTTATT TTGTCTCGGG
CTAAAAGATA TGGCAGGGGC GTGTCCTCCA CGATTCATAC GTAGGCTTGT CGAGTCTATT
CGGAAAAAAT ATCCTGATTT AGTCCTCCAT TATCATCGAC ATTATACAGA TGGATTATTT
GTACCCGCAC TTGGTGCTGC TGTTGAAGCA GGTGCACACA TTGTGGATAC TGGTATTGGA
TCTACAGTTA GGTGGTATGG ACAAGGAGAT GTTCTTGCTA CGGCAGCGTA TATTGAAGGT
GAGATTGGGG TCGATAATAA TTTGAACAAG GATATGATTC GAAAAGCCAA TTTTGTTGCT
AAGCAAATAA TGCCTTATTA TGATAGATAT ACAGCGCCAC ATTTTCAGGG TATTGACCAT
GATGTCGTTT ATCATGGTAT GCCCGGAGGT GCGACCTCTT CGTCCCAAGA AGGGGCCATG
AAGCAGGGGT ATATCCATCT TTTGCCTTAT ATGCTTCGTT TTTTGGCCGG GAGCCGGAAG
ATTGTGCATT ACCATGACGT GACCCCCGGC TCCCAGATAA CATGGAACAC AGCTTTTCTG
GCAGTAACTG GAGCGTATAA GCGTGAGGGA GAAAAAGGAG TTCAACGTCT ACTACGCATT
TTAGAGACAG TGGTCTCAAC TCCAGAAGAT TCCCTGTCTG AAGCTTTGCG TACGGCTCGT
CTTGAAATAT ATCAGGATAG CAACGATGCA TTTCGGCAAC TGTTGCTGGG TCGTTATGGG
AAGTTGCCTT TGGGGTTTCC CCCTGATTGG GTGTATGAAT CAGCTTTTGG TGAAGAATTC
AGGAAATTTT TGGAAAAAAG AACATCCTAT TCACCTTTGC CATACTTACA AGATATTAAT
ATAGAAAATG AAAAAAAAGC TCTACAAAAA GAAATAGGCC GTGAAGCATC TTCAGAGGAA
GTTGTTATGT ATTGCAATCA TCCAGGAGAT GCATTGAAAA CAATCGATTT TATTAATAAA
TATGGTGATC CTAATCAACT GCCTTTACAT GTTTGGTTTG AAGGCTTGCA AGCTAATGAA
GAAATTTATT TTAAAGATCG GCATGGCAAG CCCCATCATC TTTTTATGAA AGATATTACA
GGCCCGGATG AAAGTGGAAT CAGTACTGTT CGCTATACAT TAGATTCTGA ATCTTTCACT
CACTCAGTAC AGGTTGCTGA GCCTTCAGGA GGAGGAATCA CCGAAGTAGA AATGGCTGAT
CCCAAAGATC CGTGTCAAGT AGCAGCGCCA AGCACTGGGG ATCTTTGGGT AATGCATGTG
CAGCCTGGAG ATCAGGTGAA TAAGGGAGAC GAGATATTTA ATATTTCAAT TATGAAGCAA
GAGAAGGCTG TTTTGGCGCA AGTAAACGGA ATGGTTGAAA GGGTAGTTAA GGCAGCTAAT
TATATGGAAG ATAAGAAAAT GGTACCGGTC AAAGAGGGTG AGCTTTTGGT TGTCATAGGA
AAAGGTAAAA TCAATTGTGT TGAGTGTGGA GAGACCTTTC CGAACCAGGA TTGTATATTT
TGTCCATGGT GTGGGAAGAA AAATATATAG
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| Protein sequence | MQEKAFESVV EELRDQPILV ANRGIPARRI ARSILEVFQA VPIITATEED KTAPFTTGAQ
ELLLLGSNPQ AYLDIDLIIN RAKARGVKAI HPGWGFASED EAFPEKCRAA GLVFIGPPSR
PMHILGNKVQ VRNLAKEHGV PVVPGSDGAV SIDEARRIAE DIDFPIMLKA EGGGGGRGIY
EVYQQSELER AFAKASSLAQ ASFGNPRLYV EKLLTSIRHI EIQVIADQHG NVFAFDERDC
TVQRNHQKLV EITPSPWPVM TEELRERLKE YSRRLVSAVG YHSLATVEFL VDMEGNPYLI
EVNTRLQVEH GITECRYGID LVEEQIAVAF GAKLRLDDAK PCPGNHALQV RINCEDPQDG
FAPNAGRITR YLSPGGQGVR VDSCLAAGYE FPSQYDSAAS LLIAYGRDWS KVLGVMERAL
GEYVISGVKT TISFHQRIIA NPQFRSGDYD TTFVGKTPQL LEYVSKEAEA QRLGRLVCEI
SAYGHNPFVQ LGEYRGRSDK RLGALDVVQP EVDFDAIESP YPRGDRQALL DYVRDTEHVH
FTDTTTRDIT QSNSGNRFRL AEDRLIGPYL DNCGFFSLEN GGGAHFHVAM LANMTYPFTE
AREWNEFAPK TPKQILIRST NVLGYKPQPK NLMQRTGEMI CEHYDIIRCF DFLNHIENMR
PFAEVVANSR GNVFEPALSI TWAKEFDVDH YMQVTESVVR LMADVTGTNT YQASRLFCLG
LKDMAGACPP RFIRRLVESI RKKYPDLVLH YHRHYTDGLF VPALGAAVEA GAHIVDTGIG
STVRWYGQGD VLATAAYIEG EIGVDNNLNK DMIRKANFVA KQIMPYYDRY TAPHFQGIDH
DVVYHGMPGG ATSSSQEGAM KQGYIHLLPY MLRFLAGSRK IVHYHDVTPG SQITWNTAFL
AVTGAYKREG EKGVQRLLRI LETVVSTPED SLSEALRTAR LEIYQDSNDA FRQLLLGRYG
KLPLGFPPDW VYESAFGEEF RKFLEKRTSY SPLPYLQDIN IENEKKALQK EIGREASSEE
VVMYCNHPGD ALKTIDFINK YGDPNQLPLH VWFEGLQANE EIYFKDRHGK PHHLFMKDIT
GPDESGISTV RYTLDSESFT HSVQVAEPSG GGITEVEMAD PKDPCQVAAP STGDLWVMHV
QPGDQVNKGD EIFNISIMKQ EKAVLAQVNG MVERVVKAAN YMEDKKMVPV KEGELLVVIG
KGKINCVECG ETFPNQDCIF CPWCGKKNI
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