| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2056 |
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| Symbol | rpsQ |
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| ID | 8419901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2348339 |
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| End bp | 2348605 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645038644 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_003198918 |
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| Protein GI | 258406176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000496766 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0517422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGTG AGCTGAAATC TTCGAATAAG CGGATAATGA CGGGCTATGT CGTCAGCGAC
AGAACGGATA AGACAATCGT TGTCCGTGCT GAGACCCTGG TCAAGCATTC GCTGTACAAG
AAGTATGTCC GCAGACGGAA AAAACTCATG GCCCACGACC CTGCGAATGA TTGCAAGGTG
GGTGACAAGG TGCAGGTCAT TGAACACCGG CCGCTGAGCA GGCGTAAACG CTGGCATCTG
CACAAGATAC TTGAAAAAGC TGTTTAG
|
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| Protein sequence | MNSELKSSNK RIMTGYVVSD RTDKTIVVRA ETLVKHSLYK KYVRRRKKLM AHDPANDCKV
GDKVQVIEHR PLSRRKRWHL HKILEKAV
|
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