| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1480 |
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| Symbol | |
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| ID | 8419309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1709221 |
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| End bp | 1710432 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038055 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003198345 |
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| Protein GI | 258405603 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000744604 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTTCG ATGCCTTTTC ACTGCACGAG AAAATTACCA CAGGCATTGC CGCCTGCGGC
TTCACCCAGC CGACCCCCAT CCAGGCCCAG GCCCTGCCCC TGGCCCTGGA AGGCAAAGAT
GTTTTGGGGC TCGCCCAAAC CGGCACCGGC AAGACTGCCG CGTTTGTCCT GCCCATTTTA
CAGCGGCTCA TGAGCGGCCC CCGTCGCCGC GTCCGCGCCC TTATTGTTTC CCCGACCCGT
GAACTCGCCG AACAGACGGT CCAGGTCTGC AACCAGCTCG GCCGCCACAC CGGCCTCAAG
GCCGCTGCCG TCTACGGCGG CGTGGGCAAA AAGCCGCAGG TCGACAAAAT CCGCTCCGGC
GCCGAAATCA TCGTCGCCTG CCCGGGTCGC CTGCTCGACC ACCTGACCGA CCGCAGTTTC
AACCTCAAAC AGGTCGAAAT GCTGGTTTTG GATGAAGCTG ACCGGATGTT CGACATGGGT
TTTCTGCCCG ATATCCACCG TATTCTGAGC TACTTGCCTG CACAACGCCA GAACATGCTC
TTCTCGGCCA CCATGCCTGC GGACATCCGG GCTCTGACCG AAAAACTCCT GGTCGATCCG
GCCGAAGTCC GTATTGACCA CGAAAAGCCT TCGGCCAACA TTTCGCAGGC CCTGTATCCG
GTTGAGGCAC AGCACAAGAC ACCCATGCTG CTCAAAATCC TGGAAGACGA GCCGGACGCT
TTGACCCTGG TTTTCACCAA GACCAAGCAC GGCGCCCGGA AGTTGGCCCA GAAACTGAAG
GCCAGCGGAT ATAAAGCCGC GGATCTCCAC GGCAACCTCT CCCAGGCCCA ACGGCGCACC
GCCATGGCCG GGTTTCGCTC TGGCCGGTTC ACGATCCTCG TGGCCACGGA CATTGCCGCC
CGGGGTATTG ATGTCGAGCG CATTGCCCGG GTCATCAACT TCGACATGCC GGACACCGCG
GAAAATTATA CCCACCGTAT CGGCCGCACC GGGCGTATCG ATCGCTCCGG CTTGGCCATG
AGCCTGATCG CCAGAGGCGA CATGCACCTC GTCCGGGCCA TTGAGCGCAA TCTGGGCAAA
CGTCTGGAAC GCAAGACGAT CGATCAGATG GAACATCTGG CTCCGCCCGA ACTCATGCGG
ACCTCAAGCA AGCACAAAAA GCCCGAAGGA CCGCGCCGCT CTGGCCGCCG CCCGAGCCAG
CACCGCCGCT AA
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| Protein sequence | MHFDAFSLHE KITTGIAACG FTQPTPIQAQ ALPLALEGKD VLGLAQTGTG KTAAFVLPIL
QRLMSGPRRR VRALIVSPTR ELAEQTVQVC NQLGRHTGLK AAAVYGGVGK KPQVDKIRSG
AEIIVACPGR LLDHLTDRSF NLKQVEMLVL DEADRMFDMG FLPDIHRILS YLPAQRQNML
FSATMPADIR ALTEKLLVDP AEVRIDHEKP SANISQALYP VEAQHKTPML LKILEDEPDA
LTLVFTKTKH GARKLAQKLK ASGYKAADLH GNLSQAQRRT AMAGFRSGRF TILVATDIAA
RGIDVERIAR VINFDMPDTA ENYTHRIGRT GRIDRSGLAM SLIARGDMHL VRAIERNLGK
RLERKTIDQM EHLAPPELMR TSSKHKKPEG PRRSGRRPSQ HRR
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