Gene Dret_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1094 
Symbol 
ID8418919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1285369 
End bp1285689 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID645037666 
Productribosomal protein S6 
Protein accessionYP_003197960 
Protein GI258405218 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.380454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.02861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACA AGTATGAGGC ATTGCTGTTG TTCCACCCTG AGGTGGGCAC AGACGGCCGT 
CGGGAGACTC TGGATAAATT CGCTGGAGTC ATCAATTCCC AGGGCGGGCA AATCGTGGAA
GAAGACGACT GGGGCAAGCG CACCTTGGCC TATCCGATCC AGAAAGTGAC CCGCGGACAT
TATGTCCGGC TGGAGTTTGC GCTGGAAGGC ACGGCTGTGA CCGAGCTGGA GCGCCGGATC
CGGATCACGG ACGGAATTAT GAAGTTCTTG ACCGTGAAGT TGGCAGACAA CTTTGAGCCC
CAAGCCGAGG AGGCCGCTTA A
 
Protein sequence
MVNKYEALLL FHPEVGTDGR RETLDKFAGV INSQGGQIVE EDDWGKRTLA YPIQKVTRGH 
YVRLEFALEG TAVTELERRI RITDGIMKFL TVKLADNFEP QAEEAA