| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1077 |
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| Symbol | |
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| ID | 8418902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1268647 |
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| End bp | 1269657 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037649 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_003197943 |
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| Protein GI | 258405201 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.26154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.1511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTTTC CAGATACTGT GCTCCTTGAT TACGGCAGCG GGGGCAAAGC CTCCCAGCGG
CTTATCAGCG AACTTTTTTT GAAACATTTT GACAATGCCA CCCTCAACCG GCTGGATGAC
GCGGCAATGC TGGACCTCAG CGGACCGCTT GCCGTGAGTA CCGACAGTTT TACCGTGGAC
CCGTTGTTCT TTCCTGGTGG TGATATCGGC TCTCTTGCCA TCCACGGCAC GGTCAATGAC
GTGGCCATGC TCGGGGCGCG GCCGATGTAT CTCAGTTGCG CGATGATCGT GGAAGAGGGA
TTGCCGTTTT CCACTTTGGA AGCCGTGGTT CGGTCTATGG CTGAAGCGTC CCGACATGCC
GGGGCCCAGA TCGTTACCGG GGACACCAAG GTCGTCCCCA AAGGGGCTGT GGATAAGCTT
TTTATCAATA CGACCGGGTT GGGACTGGTC CAGACGGCTT CCCCGCCCCA GGGCGACAGG
GCCCGCCCAG GCGACGCGAT CCTGCTGACC GGGACAATGG GTGACCACGG TCTGACGATT
TTAAGCCAGC GCCAGGGACT GGAATTCGAG ACTCCGGTGC AAAGCGATAG CGCCGCACTC
AATCATATGC TGCTTGATCT GGTTGAATCG GTGGGAGAAG TCCATGTCTT GCGCGACCCG
ACGCGCGGCG GCCTGGCGAC CACACTCAAC GAGATCGCAC TCCAATCCAA TCTGGGATTC
GTGATAGAGG AAAAGGCGGT TCCGGTCTCG GATGCGGTGC GTTCCGGTTG CTCGTTTCTG
GGACTTGACC CCTTGTATCT GGCCAATGAG GGCAAGGCCA TCTGCATTGT CCCTGAAGAT
CGCTTGGATG CGGCCTTGGC TTGCCTTCGC TCCCACGACG AAGGCCGCCA GGCCTGCCGA
GTCGGCACGG TGACCGAAGA CCATCCTGGA AAGGTGGTCT TGCAGACCCC GATCGGCGGC
AAACGCTTGC TGGATATGCT TGAAGGAGAG CAATTACCGA GGATTTGCTG A
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| Protein sequence | MSFPDTVLLD YGSGGKASQR LISELFLKHF DNATLNRLDD AAMLDLSGPL AVSTDSFTVD
PLFFPGGDIG SLAIHGTVND VAMLGARPMY LSCAMIVEEG LPFSTLEAVV RSMAEASRHA
GAQIVTGDTK VVPKGAVDKL FINTTGLGLV QTASPPQGDR ARPGDAILLT GTMGDHGLTI
LSQRQGLEFE TPVQSDSAAL NHMLLDLVES VGEVHVLRDP TRGGLATTLN EIALQSNLGF
VIEEKAVPVS DAVRSGCSFL GLDPLYLANE GKAICIVPED RLDAALACLR SHDEGRQACR
VGTVTEDHPG KVVLQTPIGG KRLLDMLEGE QLPRIC
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