| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0556 |
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| Symbol | |
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| ID | 8418368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 667299 |
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| End bp | 668723 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037124 |
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| Product | heat shock protein HslVU, ATPase subunit HslU |
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| Protein accession | YP_003197431 |
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| Protein GI | 258404689 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATA CCGAGACATC TCATACGATA GCTTTGGGGC CGACTGAGTC GGAAGGGAGT
GCCAATAGCC CCCTTACCCC GCGTGAAATT GTTGCCGAAC TCGATAAATT CGTGATTGGT
CAGGATGAGG CCAAGCGCAT GGTGGCTATT GCCCTTCGCA ACCGGTGGCG CAGGCAGCAA
TTGGATCCGG AACTGGCCGA AGAGATCGCC CCCAAAAATA TCATCATGAT CGGCCCCACA
GGGGTAGGCA AGACCGAGAT CGCCCGTCGG CTGGCCAAGT TGGCTCGGGC GCCTTTTTTT
AAAGTGGAAG CCTCGAAGTT CACGGAAGTG GGCTATGTGG GACGTGATGT CGAGTCCATG
ATCCGGGATT TGATGGAAAT CGGAATCACC CTGGTTCGTC AGGAAGAAAT GGATCGCGTG
CGCGGCAAGG CTGAAGAGCA GGCCGAGGAA AAACTCCTGG ATCTGCTCCT GCCCCGCGGT
GGGAAAGAGG ACACGGCCCC ATCGGGGCAG ACCTTTTCTG ATGCAGCCGC GAGCGGTGAG
GGCGCCAAAC AGTCCACACG GGAAAAATTC CGGACCCTTT TTCGGCAGGG ACGGCTCGAT
GACCGTCTGG TCGAAGTCCA GGTTCAGGCT CAGGGACCGC AGCTGCAAAT GGCCTCCATG
CCCGGCATGG AGGAGATGGA GACGCAGTTC AAAGACATGT TCAGCAAGAT CATGCCCAAA
AAGAGCAAGA CCCGGAAAAT GCAGGTCCGT GACGCCTACG AGCATCTGGT CCAAGAGGAG
AGCGACAAGC TGATCGATAT GGACAAGGTC AGTGAGAAGG CACGGGAACG TGTCGAGCAA
AACGGGATTA TTTTTCTTGA TGAAATCGAC AAGGTCTGCA GTCAGCGCGA AGGTGGCCAG
ACCGATGTTT CCCGGGAAGG CGTCCAGCGG GATCTGCTTC CGGTGGTCGA GGGATGTGTG
GTGAACACCA AGCACGGCAT GGTCCGCACC GATCATATCC TGTTTATTGC TGCCGGCGCT
TTTCACTATG CCAAACCCTC TGATTTGATT CCCGAACTTC AGGGGCGTTT CCCTTTGCGC
GTGGAGTTGG CGGCTTTGGA AAAAGCCGAA TTTTATCGCA TCCTGACCGA ACCGCAAAAC
GCCCTGACCG TCCAGTACGA GGCGTTGCTA GGAACGGAGC AGGTTGCCCT GTCCTTCACG
GACGACGCTT TGCAGGAAGT GGCGGCATTT GCCCAGCGGG TCAATGAAGA GACCGAGAAT
ATCGGGGCGC GCCGGTTGTA TACGATCATG GAAAAGATTT TGAACACCTT GTCCTTTGAG
GCCCCGGACA AGGCTGGAAT CGAAGTGGTC GTGGATGCGG AATATGTCCG TCAGCATCTG
GAAGGACTCG AAGAAGATCG TGATTTGACG CGGTATATCC TCTAG
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| Protein sequence | MDYTETSHTI ALGPTESEGS ANSPLTPREI VAELDKFVIG QDEAKRMVAI ALRNRWRRQQ
LDPELAEEIA PKNIIMIGPT GVGKTEIARR LAKLARAPFF KVEASKFTEV GYVGRDVESM
IRDLMEIGIT LVRQEEMDRV RGKAEEQAEE KLLDLLLPRG GKEDTAPSGQ TFSDAAASGE
GAKQSTREKF RTLFRQGRLD DRLVEVQVQA QGPQLQMASM PGMEEMETQF KDMFSKIMPK
KSKTRKMQVR DAYEHLVQEE SDKLIDMDKV SEKARERVEQ NGIIFLDEID KVCSQREGGQ
TDVSREGVQR DLLPVVEGCV VNTKHGMVRT DHILFIAAGA FHYAKPSDLI PELQGRFPLR
VELAALEKAE FYRILTEPQN ALTVQYEALL GTEQVALSFT DDALQEVAAF AQRVNEETEN
IGARRLYTIM EKILNTLSFE APDKAGIEVV VDAEYVRQHL EGLEEDRDLT RYIL
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