| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0429 |
|---|
| Symbol | |
|---|
| ID | 8418234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 528460 |
|---|
| End bp | 528759 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645036990 |
|---|
| Product | protein of unknown function DUF77 |
|---|
| Protein accession | YP_003197304 |
|---|
| Protein GI | 258404562 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0011] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00106] uncharacterized protein, MTH1187 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.012919 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.254857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAT TAGCGGAATT GTCCCTTTTC CCGATGGACA AGGGCGAAAG TGTGGGCAGA
TATGTGGCCG CGGCGCTGGA GATTATTCGC AGCAGCGGCG TGCCCTATGA ATTGCATCCT
ATGGGGACCT GCCTGGAGGG GGAATGGGAC GAGGTCATGG CCGTGGTCAA GGCATGTCAC
GATCGTCTGC GCCAGGACAG CGACCGGGTG TATATGACCG TCAAGATCGA CAGCCGGGCC
GGAGATTCGG GACGCCTCCG GCGGAAAGTG GAGACGGTCC GCTCCTATCT AACCGGATGA
|
|---|
| Protein sequence | MSVLAELSLF PMDKGESVGR YVAAALEIIR SSGVPYELHP MGTCLEGEWD EVMAVVKACH
DRLRQDSDRV YMTVKIDSRA GDSGRLRRKV ETVRSYLTG
|
|---|
| |