| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0402 |
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| Symbol | |
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| ID | 8418207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 491026 |
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| End bp | 492666 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036964 |
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| Product | ferredoxin-dependent glutamate synthase |
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| Protein accession | YP_003197278 |
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| Protein GI | 258404536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.441751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTC CACCGAAGAG TAATGATGTT CTTGGAACCG TGAACCGCGG CACGCCTTGT
GAAAGCGGGC TGTGCACCTT GTGTCGGGCC GACTGCCAGG GCAAGTGCGA GATGTGGATG
TCGAGTCTGG CTGGGCGCAA GATGCTCTAT CCCCGGGATT TCGGGATCGT TACCGCCGGC
AGCGCGCGCA CGACTCACAC CGGCGTTTCA TATTCCTCGC TGCGCATTCA GGGGTTTTGC
TACGGGTCGG ACGGGCTGGC CGAAGGGTTG AGCAACGATC CCGACGACTG CGTCTTCCCC
AACGTCGGTC TGGAATCCGA GTTCGGCCGT CACAAGACGA CCAAGGTCCG CCTGCCTCTG
ATGACCGGAG CCCTGGGCTC GACGTTTATC GCCTCCAAGT ATTGGGACTC CTTCGCCACC
GGCTGCGCCC TGACCGGGAT TCCCATCGTT ATCGGCGAAA ATGTGGTTGG TGTGGACCGC
GACGCGGAAC TGTCCAACGG CCGGATCACC AAGGCCCCGG AACTCGATCG CCGCATCGAC
ACCTATCTCC GCTATTATGA CGGCTACGGC GCGATCATCG TCCAACTCAA CATCGAGGAC
GCCCGCAACG GCGTGGCCGA ATACGTGGCT GAGAAATACG GCGACCAGGT GGTCATCGAA
CTCAAATGGG GCCAGGGCGC CAAGAACATC GGTGGCGAGA TCGAAGTCAA CTCCCTTGAT
TACGCCCTGT TTCTCAAAGA GCGCGGCTAC GTGGTCGACC CGGACCCGAC CAAGCCCGGC
GTGCAGGAGT CGTTCAAGGC CGGCGGCATC CGCGCCTTTG CCCGTCACAG CCGGTTGGGC
TTTACAGACC TCTCGACTGC CGACGGCGTG AGCGAGGCGT TTATGGACGC GGTGGCCGAG
TTGCGCAAGC TCGGCTTCAG CCGCATCTCC CTGAAAACTG GTGCCTACGG CATGGAAGCC
TTGGCCTTGG CCATGCGGTT GGCCACAGAC GCGGAACTCG ATCTCTTGAC CATTGACGGC
GCTGGCGGCG GCACCGGCAT GAGCCCGTGG AACATGATGG AAAGCTGGGG CGTGCCCTCT
GTCCTGCTGC ACGCCAAGGC TGTGGAGTAC GCCAAAATGC TCGCGGCGCA GGGCAAACGG
GTCGTGGACC TCTCCTTTGC CGGCGGCTTC GGCACCGAGG ACCAGATCTA CAAAGGACTG
GCCCTGGGCG CCCCGTACAC CAAACTGATC TGCATGGGCC GCGGGTTGAT GATCCCCGGA
TTTGTTGGCG CCAATGTCGA GGGTGCTTTG AATCCAGAAC GCAAAGCGAA CGTGCATGGC
CACTGGAATT CCCTGCCCAA GGCGGTGGCG GACCGCGGTC AAAGCGCGGC CGAGATCTTT
GCCGGCTATT ACGATCTGCA GGAAAAGGTC GGTGCCGACG AGATGGCCAA TATCCCGTAC
GGCGCGATCG CCATGTGGAC GGCAATGGAC AAGATCGGAG CCGGCTTGCA GCAGCTTCTC
GCCGGTGCCC GCCACTTCAG CCTTTCGGAG ATCGAGCGCA ACGACATCGC CTCGGCCAAC
CGGGAGACGG AACAGGAAAC CGGAGTGCCG TTTATTGCTG ATGTGGAAGA TGAGGTTGCC
AAGCGGTTGC TGAAAGCTTA G
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| Protein sequence | MHIPPKSNDV LGTVNRGTPC ESGLCTLCRA DCQGKCEMWM SSLAGRKMLY PRDFGIVTAG
SARTTHTGVS YSSLRIQGFC YGSDGLAEGL SNDPDDCVFP NVGLESEFGR HKTTKVRLPL
MTGALGSTFI ASKYWDSFAT GCALTGIPIV IGENVVGVDR DAELSNGRIT KAPELDRRID
TYLRYYDGYG AIIVQLNIED ARNGVAEYVA EKYGDQVVIE LKWGQGAKNI GGEIEVNSLD
YALFLKERGY VVDPDPTKPG VQESFKAGGI RAFARHSRLG FTDLSTADGV SEAFMDAVAE
LRKLGFSRIS LKTGAYGMEA LALAMRLATD AELDLLTIDG AGGGTGMSPW NMMESWGVPS
VLLHAKAVEY AKMLAAQGKR VVDLSFAGGF GTEDQIYKGL ALGAPYTKLI CMGRGLMIPG
FVGANVEGAL NPERKANVHG HWNSLPKAVA DRGQSAAEIF AGYYDLQEKV GADEMANIPY
GAIAMWTAMD KIGAGLQQLL AGARHFSLSE IERNDIASAN RETEQETGVP FIADVEDEVA
KRLLKA
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