| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0401 |
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| Symbol | |
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| ID | 8418206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 489047 |
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| End bp | 490522 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645036963 |
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| Product | Glycosyl transferase, family 4, conserved region |
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| Protein accession | YP_003197277 |
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| Protein GI | 258404535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.140258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.190624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAT TACTCATCGC CTTTCTCTTC GCCTGGGGGC TGTGCCTGCT TCTAACCCCC
ATAGCGCGGC GCCTAGGCCG TCAATGCGGC GCCGTCGACG AACCCAATGC CCGCAAGGTC
CATGCCTGCC CAGTTCCTCG TACTGGTGGC GTTGCGATTA TTGCCGCACA CATCCTGGGC
CTGCTCACTA TTAAACTTAT CGGTACAGAC ATCAGTTCGC TTCTCACGTC CGAAACCGCT
CTGCTCTCCC TCTGGGGCGG GGCCGCCCTC GTCTTCGGCA TTGGACTGTG GGACGATTGT
AAAGGGCTGG CAGCCAAACC CAAACTTGCA GTCCAAGTTC TCGCAGCCAC TTGCGCCTTT
TTCGGCGGCG TGGCCATTGA CCCAAGTCCC CTTTTTGGCT GGCTCCCCAT TCTTGACTCC
TGGCTCGGCA GCTACCTGTT GACCCTGTTC TGGTTTGTCT TGCTCATCAA TGCCATGAAC
CTTATTGACG GTCTCGACGG CCTGGCTGGG GGCATCGCTC TCTTTGTCTG TCTAGTGCTT
TCCGTGATCC AGGTCATCAA CCGTGATTTT CTTCTGGCCC TCTATTTCCT CACTCTGGCC
GGAAGTGTTG CCGGTTTCCT GCGCTACAAC TTTAACCCGG CGACCATTTT TATGGGCGAC
AGCGGCAGCT ATTATCTCGG CTTCATGATC GCCGGATTAA GTATACTCGG CTCTGTCAAA
AGCCATGTCG GCGCCACCCT CACTCTTCCG CTTCTGGCCA TGGGGGTTCC GGTCTTCGAC
ACCCTGTTCG CCCCGGTGCG CCGTATTATT CTCGGTCGCA GACCTTTTGA ACCTGATCGA
CACCACTTGC ACCACAAACT CCTCGCTCTG GGCCTGTCCT CAAAGCGCGT TGTCTTGGTA
CTATACGCGG TCACCGCAGC TCTCTGTGCC ACTGCCCTCA TCCTGGTGAA CCTCCAGGAC
GAACAAAGCG GCCTGCTGCT GGTGCTCCTT GGGGTCGGGG TAGTCATCGC CCTGAACGGG
TTGGGGTACT TCCGGTATGT GGACCGGGAA AAGGTGGGAT CCTGGTTTCG CGACGTCGGC
TTCGTCACCG GCCTGCACCG CGATCGGCGC CGTTTTCTGG ATCTGCAGGT CCGAATCAAT
CAAAGTCAGA CCTTCGATGC CCTTTGGGAG ACCATAGCCC ACGGACTGGC CTTGCTTGAT
ATCGACTATG GGGAAATTCG ATTGACTTCA AATTCAGAGG CTACAGATGT CCACCGCAAT
TGGACACGAT CCAAGAAAGG GATTGACCTC CAGGCTCAAG GGTTGTTGAA GATGGAGTTG
CCCTTGCAGT GTCAGGAAGG CCGCTACTTA GGAGAGTTGT GGCTGGTTAA AGACATCAAA
CGCTCCGACC TCGGGCACTA CACCCTCAGC CGGATTGAGC ACCTGCGACG GGCGGTGGTG
CGGACCTTAT CCAGATGGGA CAAACCCAGC ACGTAA
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| Protein sequence | MTTLLIAFLF AWGLCLLLTP IARRLGRQCG AVDEPNARKV HACPVPRTGG VAIIAAHILG
LLTIKLIGTD ISSLLTSETA LLSLWGGAAL VFGIGLWDDC KGLAAKPKLA VQVLAATCAF
FGGVAIDPSP LFGWLPILDS WLGSYLLTLF WFVLLINAMN LIDGLDGLAG GIALFVCLVL
SVIQVINRDF LLALYFLTLA GSVAGFLRYN FNPATIFMGD SGSYYLGFMI AGLSILGSVK
SHVGATLTLP LLAMGVPVFD TLFAPVRRII LGRRPFEPDR HHLHHKLLAL GLSSKRVVLV
LYAVTAALCA TALILVNLQD EQSGLLLVLL GVGVVIALNG LGYFRYVDRE KVGSWFRDVG
FVTGLHRDRR RFLDLQVRIN QSQTFDALWE TIAHGLALLD IDYGEIRLTS NSEATDVHRN
WTRSKKGIDL QAQGLLKMEL PLQCQEGRYL GELWLVKDIK RSDLGHYTLS RIEHLRRAVV
RTLSRWDKPS T
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