14 homologs were found in PanDaTox collection
for query gene Dret_0169 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_0169  ferredoxin  100 
 
 
74 aa  146  9e-35  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.925879 
 
 
-
 
NC_013173  Dbac_2977  4Fe-4S ferredoxin iron-sulfur binding domain protein  48.33 
 
 
60 aa  50.4  0.000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0154  4Fe-4S ferredoxin iron-sulfur binding domain protein  45.9 
 
 
63 aa  50.1  0.00001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.286313 
 
 
-
 
NC_013926  Aboo_0900  4Fe-4S ferredoxin iron-sulfur binding domain protein  36.07 
 
 
68 aa  46.2  0.0001  Aciduliprofundum boonei T469  Archaea  normal  0.800089  n/a   
 
 
-
 
NC_008554  Sfum_2933  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  38.1 
 
 
64 aa  44.7  0.0004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1503  hypothetical protein  37.5 
 
 
75 aa  43.1  0.001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009486  Tpet_0002  tRNA (guanine-N(7)-)-methyltransferase  37.7 
 
 
349 aa  42.7  0.002  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1080  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  34.48 
 
 
62 aa  42.4  0.002  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00122069  n/a   
 
 
-
 
NC_008751  Dvul_2676  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  38.98 
 
 
64 aa  42  0.003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1814  4Fe-4S ferredoxin iron-sulfur binding domain protein  37.93 
 
 
64 aa  42  0.003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_3023  ferredoxin  37.04 
 
 
61 aa  41.6  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.667547  n/a   
 
 
-
 
NC_007519  Dde_0286  ferredoxin II  40.98 
 
 
64 aa  41.6  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00127142  n/a   
 
 
-
 
NC_008312  Tery_2579  ferredoxin  34.33 
 
 
151 aa  40.4  0.008  Trichodesmium erythraeum IMS101  Bacteria  normal  0.698297  normal 
 
 
-
 
NC_011726  PCC8801_1897  ferredoxin  35.48 
 
 
137 aa  40  0.01  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>