Gene Dret_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0140 
Symbol 
ID8417944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp181333 
End bp181713 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content54% 
IMG OID645036705 
Productdesulfoferrodoxin 
Protein accessionYP_003197020 
Protein GI258404278 
COG category[C] Energy production and conversion 
COG ID[COG2033] Desulfoferrodoxin 
TIGRFAM ID[TIGR00319] desulfoferrodoxin FeS4 iron-binding domain
[TIGR00320] desulfoferrodoxin
[TIGR00332] desulfoferrodoxin ferrous iron-binding domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.450911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC AATTGCAAGT GTACAAATGC GAACAATGCG GGAATATTGT CGAAGTCCTG 
CACGGCGGGG CTGGCGATCT GGTCTGTTGC GGTGAAAACA TGAAATTGAT CGAAGCCGGC
ACCGTTGACG CGGCCAAAGA GAAACACGTC CCGGTCATCG AGAAGACCGA CAAGGGCTAT
AAGGTCAGCG TTGGCTCCGT TCCGCACCCC ATGGAAGAAA AACACTACAT CGAGTGGATC
GAACTTATTG CCGACGGCAA AGCGTACCGG CAGTTTCTCA AGCCAGGCCA GACGCCTGAA
GCGGAATTCT GCATCGAAGC CAAGGCTGTC ACCGCACGAG AGTACTGCAA TATCCACGGT
CTGTGGAAGG CTGAAGCCTA A
 
Protein sequence
MPEQLQVYKC EQCGNIVEVL HGGAGDLVCC GENMKLIEAG TVDAAKEKHV PVIEKTDKGY 
KVSVGSVPHP MEEKHYIEWI ELIADGKAYR QFLKPGQTPE AEFCIEAKAV TAREYCNIHG
LWKAEA