| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3219 |
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| Symbol | |
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| ID | 4957426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 3501703 |
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| End bp | 3502452 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640182407 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001114546 |
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| Protein GI | 134301050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCGAAA ATGAAAAATT ACGGCTGGAT CGGCTGTTAA ACCATATGGG GTTAGGTACT
CGAAAAGAGA TTAAAAAATT GATTAAAGCA AAACAAGTAA TGGTTAACGG GGAATTGGCA
ATGGACCCTG GCTTACACAT TTTTCCCCAG CGTGACCACA TTGAGGTACA GGGTGAGGTT
ATAGAGTATA GGGAATATAT CTATCTCATG TTAAATAAAC CCCAGGATGT TTTGTCCGCC
ACAGAGGATG CTTCAGACAA AGTGGTCATC GACCTGCTTG ACCCCACATA TCATTCCTTT
AACCCCTTTC CGGTGGGGCG GTTGGATAAG GATACCGAGG GGTTGCTGCT ACTTACAAAC
AACGGTAAGC TGGCTCACCA ACTCCTCTCT CCGAAAAAAC ATGTGCCCAA AACCTATTAT
GCTCTGGTAC AGGGCCTTGT TACAGAAGAA GACGTGGCCG CCTTTGCCCG GGGAGTGGAA
CTGGATGACG GTTATCGCAC CCTGCCAGGG CAGTTAAAAA TTATCCGCTC GGCCCCTCAA
TCAGAAATTG AACTCACCAT CTATGAGGGC AAGTATCACC AGGTTAAACG TATGTTTGAA
GCCGTTGGCA AAAGGGTTAT TTATCTTAAA AGGCTTAGCA TGGGTCCCTT GGTGCTGGAT
AATAATCTGA AGCCCGGCGA ATATCGGGAA CTAACGGATG AGGAAATTGC ACTGTTACAG
GAAGCAAAAA CGAGGCACTC CGTCCAGTAG
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| Protein sequence | MAENEKLRLD RLLNHMGLGT RKEIKKLIKA KQVMVNGELA MDPGLHIFPQ RDHIEVQGEV
IEYREYIYLM LNKPQDVLSA TEDASDKVVI DLLDPTYHSF NPFPVGRLDK DTEGLLLLTN
NGKLAHQLLS PKKHVPKTYY ALVQGLVTEE DVAAFARGVE LDDGYRTLPG QLKIIRSAPQ
SEIELTIYEG KYHQVKRMFE AVGKRVIYLK RLSMGPLVLD NNLKPGEYRE LTDEEIALLQ
EAKTRHSVQ
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