Gene Dred_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2063 
Symbol 
ID4955879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2259026 
End bp2260282 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content47% 
IMG OID640181232 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_001113405 
Protein GI134299909 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000172774 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGACT ACATTGTACG AGATATTAAC CTGGCCCCTG CGGGTCGTTT AAAGATTGAC 
TGGGTTCGCC AACATATGCC GGTATTGAAT GAAATCCGTG CACAGTTTGA AAAGGAGCAA
CCCTTTAAAG GGTACCGGGT GGCGGTATGC ATTCACTTAG AGGCTAAAAC CGCTTATTTG
GCAGAAGTTT TGAGGGCCGG TGGTGCGGAG GTTTCCATTG CTGGTTCAAA TCCGTTGTCT
ACCCAGGATG ATGTTGCCGC AGCTCTGGCA GCGGCAGGAC TGAATGTTTA TTCCTGGTAC
AATGCTACCG ATGAAGAGTA TAAAGAACAT CTACTGCATT TAATAGATGA CCAGCCGGAC
ATTGTCATTG ATGATGGCGG TGATGTTGTT CAGTTGTTGC ATACCGAAAG AACAGAAGCT
GCTTCCCGGG TGCTGGGAGG TTGCGAGGAG ACCACCACCG GGGTATTGCG CCTACGCTCC
CTAGCCAAAC AGGGGGAATT GAAATTTCCC ATGATTGCCG TAAATGATGC CTATTGTAAG
TATCTTTTTG ATAATCGCTA TGGCACAGGG GAGTCGGTAT GGTCCGGTAT AATGCGTACC
ACAAACCTGA TTACTGCGGG GAAAACTGTA GTAGTAGCGG GTTACGGCTG GTGCGGTAAA
GGTATCGCCA TGCGTGCCAA GGGAATGGGG GCCAAGGTGA TTGTTACAGA GGTCGATCCC
GTAAAGGCCA TCGAAGCTTA TATGGATGGA TTCCATCCCA TGAATAGCTT AGAAGCTGCT
AAACTGGGGG ATATTTTTAT TACAGTTACT GGATGCAAGG ATGTGTTCAC TGGCGTACAC
TATGAACGTA TGAAAGACGG GGCTATTCTC TGTAATGCTG GACATTTTGA TGTGGAGGTT
AACAAACCAG ATTTGCTAGC CTTAGCAACC TCCCGGAGGA TTGTTAGAAA GGACATTGAG
GAGTTTACCA TGAAAGATGG CCGGAAAATT TACTTATTAG CAGAGGGGCG TCTAGTTAAC
CTTGCTGCGG GTGACGGACA TCCGGCAGAG ATCATGGATA TGTCCTTTGC TCTTCAAGCC
CTAAGCGCTA GATATGTGTT GGAGAATGCT AAAAAGTTAT CTAATGAAGT ATACGTGGTA
CCGAAGGAAA TTGATGACCG AGTGGCCAAT CTAAAACTAA AATCTTTGGG AGTGGATATT
GATTCCCTCA CGCCTGAGCA AGAAGCCTAT ATTAACGAGT GGAACCATGG TACCTAA
 
Protein sequence
MPDYIVRDIN LAPAGRLKID WVRQHMPVLN EIRAQFEKEQ PFKGYRVAVC IHLEAKTAYL 
AEVLRAGGAE VSIAGSNPLS TQDDVAAALA AAGLNVYSWY NATDEEYKEH LLHLIDDQPD
IVIDDGGDVV QLLHTERTEA ASRVLGGCEE TTTGVLRLRS LAKQGELKFP MIAVNDAYCK
YLFDNRYGTG ESVWSGIMRT TNLITAGKTV VVAGYGWCGK GIAMRAKGMG AKVIVTEVDP
VKAIEAYMDG FHPMNSLEAA KLGDIFITVT GCKDVFTGVH YERMKDGAIL CNAGHFDVEV
NKPDLLALAT SRRIVRKDIE EFTMKDGRKI YLLAEGRLVN LAAGDGHPAE IMDMSFALQA
LSARYVLENA KKLSNEVYVV PKEIDDRVAN LKLKSLGVDI DSLTPEQEAY INEWNHGT