| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1694 |
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| Symbol | dapF |
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| ID | 4956201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1853501 |
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| End bp | 1854355 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640180869 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001113046 |
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| Protein GI | 134299550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0440642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTACTTTA CCAAAGTGCA TGGTTTAGGA AACGATTTTA TCTTGGTAAA TGCAGGGACT
GGTCAGGGGT TTACGGATGA CTGCAGCACA CTGGCCAAAG AAGTCTGTGA TCGCAAGTTT
GGCATAGGTG CAGATGGGCT GGTGCTGCTA TATGACTCCG GAGTAGCAGA TGTAAGGATG
AAAATAGTAA ACTCCGATGG TAGTGAAGCA GAAATGTGCG GTAATGCCAT TCGGTGTGTA
GCTAAGTACT TGTATGATCA TGGCATAATA AAAAAGGATG AAATTAAAGT TGAAACATTG
GCGGGCATCA TAGTGCCCCA AATTATTCAA CAAGAAGGCA GTGTAAAAGC TGTCAGGGTG
GATATGGGGG AACCTAGGGT AGAAAGGGCT GAGATTCCAA TGATTGGCCC GCCGGGGCAG
GTTATTGGTG AAGAACTAGC TGTAAACGGT AAGGTATACT TGGTGACGGC TGTCTCAATG
GGAAATCCCC ATTGTATCAT ATTTGTGCCT GATCTGGAGG ATATTTCTCT GACCCAAGTT
GGGCCTCAGA TAGAAGTACA TCCGGCCTTT CCCAAAAAAA CCAATGTGGA GTTTGTTCAA
GTCTTAGGTC CTAACGAAGT TCGCATGGTC GTTTGGGAGC GGGGGGCAGG CCCCACCATG
GCTTGCGGAA CCGGAGCTTG TGCGGTGGCA GTGGCAGGGG TATTAAATGG GTTTACAGAA
AGAATGGTCA CTGTGCATTT GCCTGGTGGC TCCCTTATGA TTGAATGGGC AGAGAACGGA
AGAATTTATA TGACTGGACC AGCCACGGAA GTCTTTAGCG GTGAATATAC AGTATACAAC
CCGTCCCGGC GTTGA
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| Protein sequence | MYFTKVHGLG NDFILVNAGT GQGFTDDCST LAKEVCDRKF GIGADGLVLL YDSGVADVRM
KIVNSDGSEA EMCGNAIRCV AKYLYDHGII KKDEIKVETL AGIIVPQIIQ QEGSVKAVRV
DMGEPRVERA EIPMIGPPGQ VIGEELAVNG KVYLVTAVSM GNPHCIIFVP DLEDISLTQV
GPQIEVHPAF PKKTNVEFVQ VLGPNEVRMV VWERGAGPTM ACGTGACAVA VAGVLNGFTE
RMVTVHLPGG SLMIEWAENG RIYMTGPATE VFSGEYTVYN PSRR
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