Gene Dred_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1443 
Symbol 
ID4956952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1564994 
End bp1565905 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content37% 
IMG OID640180618 
ProductLysR family transcriptional regulator 
Protein accessionYP_001112798 
Protein GI134299302 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTT CTCATTTCAA GGTTTTTAAA ATCCTTGCGC AAACTGAGAA CATTACTAAG 
GCTAGCAAAT TACTAGAATT GTCTCAACCA ACCATTAACC ATAATATTTA TTTACTCGAG
CAACATTATG GTGCTAAACT GTTTGATCGA TCCAATAAAA AACTTAAACT AACTCGTTTT
GGTGAAGTAT TGGTGAAGTA TGTTAATCAA ATACTGAACC TCGTTGAGCA ATCCGAGCAA
CACATTCATG AATTGGTGGG AGAACTTCGT GGAAGCCTGA ATTTGGGGGC CAGTCATACC
ATTGCAGAAA ATGTTTTGCC AAAAATTATG GGTATGTTTA ATCATGATTA TCCAGAGGTT
ACCATTCATC TTGAAGTAAC CAATACCCGT CACATTGTTG ACCACATTTT AGATAATAAG
TTGGATTTAG GACTTATTGA AGGACCTGTG ACCCATGATA ATATCATTTC AAAGCCCTTT
ATGGAGGATG AACTTCTCGT TGTTTTACCC TATAACCACC CCTTAGCAAT TAAAAAGAAT
CTTACCATTA AAGAAGTTGC CAACCTTCCC TTTGTTTTGA GAGAAGAAGG TTCCGGTACC
CGAGTTGTTA TGGAATCTAC TCTAAAAGGT GCAGGCTTGG ACCCTTCTGA TCTAAATACT
GTTATGGAGT TGGGTAATAC ACAGGCAGTT ATCGGCGCCG TAGAAGCTGG TCTAGGAGCT
ACGATCTTAT CGGGATTAGC AGTCAGTAAA GAAATACAGT TAAAAACCGT AAAGACCTGC
CGAATTTCCA ATGTAAATAT CGTTCGCAAC TTTTCAATTA TTATCAACAA GGAAAAGCCA
TCTTCTTCGA TTATTCAAAC CTTTCTAGGC TTTATTAATT CGGAAGAAAT AAAAAAGATC
TTTAAGGTAT AA
 
Protein sequence
MNLSHFKVFK ILAQTENITK ASKLLELSQP TINHNIYLLE QHYGAKLFDR SNKKLKLTRF 
GEVLVKYVNQ ILNLVEQSEQ HIHELVGELR GSLNLGASHT IAENVLPKIM GMFNHDYPEV
TIHLEVTNTR HIVDHILDNK LDLGLIEGPV THDNIISKPF MEDELLVVLP YNHPLAIKKN
LTIKEVANLP FVLREEGSGT RVVMESTLKG AGLDPSDLNT VMELGNTQAV IGAVEAGLGA
TILSGLAVSK EIQLKTVKTC RISNVNIVRN FSIIINKEKP SSSIIQTFLG FINSEEIKKI
FKV