Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0954 |
Symbol | |
ID | 4957731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1009677 |
End bp | 1011026 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640180124 |
Product | type II secretion system protein E |
Protein accession | YP_001112314 |
Protein GI | 134298818 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTTTT TAACCAAAAA ACAAGAACAA ATCACAGAAA TCAATGTAGG TCTGGTATCC TACGAAAAAG CAAAGGATTT GATAAGACAA TTTATTGCTA CTCCTGAACA CTATGAAAAT GATAACGAAA AAGCAAAGGT AAAAAAACTA GAACTTGAAA GTATGAAGGG TGAAAAGAAG GCTAAACAAG AGTTAATTGA CTACCTGGTT GAAACAATGA TCAGATATAA GTTTGAAATT GAGGGGATGA TTCTTCATGA AGCTGCTATA GAGATATACA AAGAGACCTG GGGGTTGGGA ATCATAGAGG ATATTTATCA TGACCCTGAA GTTGATGAGG TTGAAGTAAA TGGTATTCAT AATATATACT CCATCCGCAG AGGCAGGTAC TGCAGAGAAA ACGTAATTTT TAATTCAGAA CAAGAGCTAA TGGCCTTGAT GGGTAGAATA TTTGTCGACT ACTGTGCTGT TAACGAAGGC AACCCTGTTG GAAGAACTGT TCGGGTAGAT GGGACCAGAG TATTAGCCAC TGTTCCCCCT TTTACCAATA CAATCACCCT TACAATGAGA AAGCACAATA CATTTATTTA CTCAAAGGAT ACCTTGACCC AGGTTGGAAC TTTAGATCCC AGAATATATG ATGCCCTAGC CCTATTTAAC AGGGGATTAC TAAATATTCT TTATTCCGGC CCCACCAATG GTGGCAAAAC CACTATGTTG AGACATTTTT TTAGATATAG TCCTCCCGAT ATCAGGACCG TACTGTTAGA ACCAAGACAT GAGCTAAAGC TACAAGAAAA CTACCCCGAA TGGAATATTA TTGAGTTTCA GGAACTCCCC CAGCAACGAT TAACTCTATT GCAAGCCTTT GAAACAGCAC TGCAAGTAAC TCCGGTAAGG ATCATAACCG GTGAGATCCT GGGTGGTAGG GAAGGCCCAG AGGCAATTAA ATCAGGAAAC CGGGGGCATA CAGGAAATCT ATCAACTATC CACGCAGAGA CAGTAGAAGA CGCCATTTTA GAACTGACCA ACATTCTTGT GGAAGAAGGT AGATCCCAAA GTATTACGAA GGAACAAGCC ATGGAAAGGG TATGTAGGGC ATTTGATGTA ATTGTCCAGA TATTCGTCCC ACCTCAATCA GGAGTAAAAA AAGTGGTCGC TGTTGGAGAA CCAAAATTTG TTGATGGAAC TGTAAAAGTT ATTAACTATT TTGAATGGCA GCCATCTGAG GAAGATTTCC TAAAGGGTTA CTGGCAATAC CCTAATCCTT TATCAGAAAG ATTAATTAAA AAGCTGCATC GAAATGGTGT TCCAGCGGAG GAATTAAAAA GGGTGGGGCT TATATGGTAG
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Protein sequence | MGFLTKKQEQ ITEINVGLVS YEKAKDLIRQ FIATPEHYEN DNEKAKVKKL ELESMKGEKK AKQELIDYLV ETMIRYKFEI EGMILHEAAI EIYKETWGLG IIEDIYHDPE VDEVEVNGIH NIYSIRRGRY CRENVIFNSE QELMALMGRI FVDYCAVNEG NPVGRTVRVD GTRVLATVPP FTNTITLTMR KHNTFIYSKD TLTQVGTLDP RIYDALALFN RGLLNILYSG PTNGGKTTML RHFFRYSPPD IRTVLLEPRH ELKLQENYPE WNIIEFQELP QQRLTLLQAF ETALQVTPVR IITGEILGGR EGPEAIKSGN RGHTGNLSTI HAETVEDAIL ELTNILVEEG RSQSITKEQA MERVCRAFDV IVQIFVPPQS GVKKVVAVGE PKFVDGTVKV INYFEWQPSE EDFLKGYWQY PNPLSERLIK KLHRNGVPAE ELKRVGLIW
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