| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0173 |
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| Symbol | |
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| ID | 4955817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 180916 |
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| End bp | 181989 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640179326 |
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| Product | shikimate/quinate 5-dehydrogenase |
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| Protein accession | YP_001111547 |
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| Protein GI | 134298051 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000696733 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT TTGCTTTTAT TGTACACCCA CTGGATTGCA GTGATGTGGC CAGAAAATTT
AACTTTACAC GCTATATGCC AGATACCCTG GTTGAACAGA CTCTAAAACT GCTCCCCCCT
GTTCAGATAT CTTCCATCAC AGGAATCCGT TCCCCAGAGG CAGAAACCAA GGGGGCCTTT
GTGTCCTGCC TGCTTACAAC GAAACAAATG ATAACACTAC CGCAGCAATT TGTTATAAAT
AAGGTTATTC AGGCCGGCCG CCTGGCTGAA AAATTAGGGG CTAATGTTGT GGGGTTAGGA
GCTTTTACAA AAGTGGTTGG GGATGCTGGT ATAACTGTGG CAAAAAATCT AAAAATACCC
GTAACAACGG GTAACAGTTA CACCGTTGCC ATGGCCCTGG AAGGAGCAAA GAAAGCCGCA
CAATTAATGG GTCACGATTT GAAGAAATCA CGGGTTACAG TGGTGGGGGC CACTGGAGCC
ATTGGCAGTG TATGCGCATT GTTTTTAGCC AGAGATGTAA AGAATTTAAC CTTGGTTGGT
AGAAACGAGG CAAAACTGCA CCTGCTGGCA GATCGTATTA TGTATGAGAC TGGATTGGCA
GCAGAGGTCA ACTCCAATAT TAAATCCGTC CTAAGAAAGT CCGAACTGGT TATTACTGTA
ACTAGTTCGA TGGATACCAT TATTCAGCCA GAGGATTTAA AACCAGGGGC GGTGGTGTGT
GATGTAGCCA GACCAAGGGA TGTTTCCCGT CGGGTAGTAG AGGAAAGGGA TGATGTTCTG
GTTATCGAAG GAGGGATTGT TGAGGTTCCA GGAGATGTCA ATTTCAATTT TAATTTTGGC
TTTCCTCCAA AAACTGCCTA TGCATGTATG GCTGAAACTA TGATATTGGC CCTTGAAGGA
AAAATGGAAA GCTATACATT GGGGCGAGAA CTAACTCTCA AGCAGGTAGA GGAGATCTAT
CAATTAGGTA AGAAACACGG TTTTCGCTTA GCAGGATTCC GCAGCTTTGA AAAACCCATA
TTAGAAGAAG AGATTAGTTT AATAAAACAA AGGGCATTAA TAAAAGCATC TTAG
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| Protein sequence | MKSFAFIVHP LDCSDVARKF NFTRYMPDTL VEQTLKLLPP VQISSITGIR SPEAETKGAF
VSCLLTTKQM ITLPQQFVIN KVIQAGRLAE KLGANVVGLG AFTKVVGDAG ITVAKNLKIP
VTTGNSYTVA MALEGAKKAA QLMGHDLKKS RVTVVGATGA IGSVCALFLA RDVKNLTLVG
RNEAKLHLLA DRIMYETGLA AEVNSNIKSV LRKSELVITV TSSMDTIIQP EDLKPGAVVC
DVARPRDVSR RVVEERDDVL VIEGGIVEVP GDVNFNFNFG FPPKTAYACM AETMILALEG
KMESYTLGRE LTLKQVEEIY QLGKKHGFRL AGFRSFEKPI LEEEISLIKQ RALIKAS
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