Gene Dole_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2398 
Symbol 
ID5695246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2888956 
End bp2889771 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID641265004 
Productresponse regulator receiver protein 
Protein accessionYP_001530279 
Protein GI158522409 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1102] Cytidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTA TAACGATTTC ACGGGGGTCC TCCTCCATGG GAAAGGCCGT GGCCGAACAG 
GTGGCCCGGC GGCTGGGCTA TCGGCTGATC AGCCGGGAGG TACTGCTGGA CGCCAGCAGC
CGGTTCAACG TGCCTGAGAT CAAGCTGGAA AAGGCCATTC ACGACGCGCC GGGCATTCTG
GATCGCTACC GTCACAGCAG CCAGTCCTAC GTGGCCTATA TCCGTTCGGC CCTGGTGGAA
CAGGTGGTGG CGGACAACGT GGTCTACCAC GGCCTGGCCG GCCACCTGCT GCTCAAGGGG
CTTTCCCAGG TGCTCAAGGT ACGGATCAAC GCGGACATGG AAAAGCGCGT CGCCGTGGTC
ATGAAGCGGG ATCGGATTCC AGCGGATGAG GCGCGAAACC GCATTCAGGA AGACGACCGG
CAGCGCCGGA AATGGACTCA GGCCCTGTAC GGTCAGGATC CCTGGGACGC CTCCCTCTAT
GACCTGACCA TCTGCATTGA CACGCTTTCC GTGGACAATG CCGTGGATTT TATCTGCCAG
GCCGCCGGCA CCGATGGGTT TCAGGCAACG GAGAAAAACC GCCGGCAGGT ATCGGACATG
GCCGTGGCCT GCCGGGTCAA GGCGGCCCTG GTGGATGAGT TTCCCCATGT GGGTGTGACC
TGTGAATACG GGAACGTGCT GGTGTACACC GGGACCGGGT CGGATCACGG CAGCGGGAAG
CTTGCCAAAA AGATCGATCG TGTTCGAGAA ACGGTGGAAG GCATTTTTCA TATTGAGATT
CATTCGGGAG TGGTGGTGCC TGCGGAGGCC GTCTGA
 
Protein sequence
MAIITISRGS SSMGKAVAEQ VARRLGYRLI SREVLLDASS RFNVPEIKLE KAIHDAPGIL 
DRYRHSSQSY VAYIRSALVE QVVADNVVYH GLAGHLLLKG LSQVLKVRIN ADMEKRVAVV
MKRDRIPADE ARNRIQEDDR QRRKWTQALY GQDPWDASLY DLTICIDTLS VDNAVDFICQ
AAGTDGFQAT EKNRRQVSDM AVACRVKAAL VDEFPHVGVT CEYGNVLVYT GTGSDHGSGK
LAKKIDRVRE TVEGIFHIEI HSGVVVPAEA V