Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1973 |
Symbol | |
ID | 5694813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2385796 |
End bp | 2387526 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264571 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001529854 |
Protein GI | 158521984 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG CCCGGATACC CGCCCATAAT TCCCACGCCA ACCTTTCCGG CTACGTGGCC GCGCGCCGGT CGTTCAAGTG GTCGAATGCG GCTGCCGAAC TGGGCATCAA CAGCGATGCC GGGGTCAACA TCATCGCGCA ATCCATCGAT AAATGGGCCG CCCGGCCGGA CACGGCCGGA CAGCCGGCCA TGATATTTCA CAAGGGCGGT CACACCGATA TCTACACCTT TTTGCAGATG CGCGACATCT CGGCCCGGTG GGCCGGTTTT TTTGTCAAAA ACGGTCTTGA GGCCGGCGAC TGCCTGATGA TTTTTCTGCC GCCCTGCCGG GCGTTCTTTT TTGCCATGGC CGCCTGCGCA AGGGCAGGCA TTGTGTTCTG CCCGGTGTTT GCCTCTTCCG GTTACAGTGA ACTGGAGTCC CGGCTGGCCG ATATCGCGCC CAAAGCTGTC CTGACCGACC CCGGCCTGGT GGAGATGATT CCACCGGAAA GGGCCGCAGC ATTGAAAACC CTTTTTCTCA CCACAGACGC TCCCGGGCTG TATGACAATG AAATTGTTGT GGGAGACGGG CCCGCGTCCC TGCCTGCCGA CTTTTCACCG CGCCTGGTGA CCCCGGGAAC CGCCCTTTAT GTCGTTTACA CCTCCGGCTC CACCCGGCCG CCCAAGGGTA TCATTCACGG CCATGGCGAT ATGGTCGGCA TCTACGCCTC CGCGAAATGG GTACTGGACC TGAAGGCCGA TGACGTGCTG TGGACCGATG CCGACCCGGC CTGGGTCACC GGAACGGTTT ACGCGGCCCT GGCCCCCTGG CTTTGTGGCG TGGCCTCTGT GGTTTCAGAA GCCCCTGCCC CTTCTTCCGC CGTCAATGCG TACCGCACCC TTGAGGCCTG CCGGGTGACG GTGTGGTACA CCACGCCCAA TACCATCCGT GGCCTGATGG AGGCCGGCGA GGACCTGCCC GGCCGTTACA ACCTGGACGC CCTGCGCCAT ATCGTCACCG TGGGTGCCCC GTTAATGCCC GATCCTTTTT ACTGGGTCCG AAAACACCTG GGCCTTTCTC CTCATGACAA CTGGTGGATG TCTGAAACCG GCATGATCTG CATCGCCAAT CTGCCCTGCC TGGACATTAA GCCCGGCGCC ATCGGCAAAC CCCTGCCCGG CATCGAAGCC GCCGTCCTGG ACGACAGCGG CTGGGAACTG CCGGCCCTCT CCATCGGACA GCTGGCCCTC AAGTCCGGGT GGCCGGCCAT GATGGTCGGG TTGTGGGGTG ACCGGGCCCG GTATGAGGGT CATTTCCAAA ACAACTGGTT TCTCACCGGC GATATTGCCC TTCAGGACGA AGAGGGCTAT TTCTATCACC AGGGACGGCT GGACGATATT CTGAAAACCA GGGAAAACCG GGCCATCGGG CCCTTTGAAA TCGAACAGGC CCTGTGCGGT CACCCGGCCG TGGCCGAAGC CGCAGTCATT GCCAGGGGAG GGGACCGGGA CACCGGCACC TCTTCGATCA AGGCTTTTGT CACCCTGAAG CCTGGCAATC CGGCTTCCTC CCGGCTCAAT CGGGAGATCC GCATGTTTCT CAAGGCCGGC GTGGCCCCGG ACATTGACGT GGATGAAATC ACCTTTACTG AAAAACTGCC CCGCACCCGC AACGGTAAAC TCCTGCGCCG TGTCCTGCGC GCCTGGGAAC TGGGGCTGCC CGGCGGGGAT GCAGTCAGTA TGGAAGATTG A
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Protein sequence | MIKARIPAHN SHANLSGYVA ARRSFKWSNA AAELGINSDA GVNIIAQSID KWAARPDTAG QPAMIFHKGG HTDIYTFLQM RDISARWAGF FVKNGLEAGD CLMIFLPPCR AFFFAMAACA RAGIVFCPVF ASSGYSELES RLADIAPKAV LTDPGLVEMI PPERAAALKT LFLTTDAPGL YDNEIVVGDG PASLPADFSP RLVTPGTALY VVYTSGSTRP PKGIIHGHGD MVGIYASAKW VLDLKADDVL WTDADPAWVT GTVYAALAPW LCGVASVVSE APAPSSAVNA YRTLEACRVT VWYTTPNTIR GLMEAGEDLP GRYNLDALRH IVTVGAPLMP DPFYWVRKHL GLSPHDNWWM SETGMICIAN LPCLDIKPGA IGKPLPGIEA AVLDDSGWEL PALSIGQLAL KSGWPAMMVG LWGDRARYEG HFQNNWFLTG DIALQDEEGY FYHQGRLDDI LKTRENRAIG PFEIEQALCG HPAVAEAAVI ARGGDRDTGT SSIKAFVTLK PGNPASSRLN REIRMFLKAG VAPDIDVDEI TFTEKLPRTR NGKLLRRVLR AWELGLPGGD AVSMED
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