| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1895 |
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| Symbol | |
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| ID | 5694735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 2297964 |
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| End bp | 2300060 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641264493 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001529776 |
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| Protein GI | 158521906 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.196702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACG GTAATATGCC GACCCAGTAC GACAAAAAAG CGGTTCATGC CATTTTAAAG
GCCCGGCCTG AATTGTCTCC AGACCTGGCC GCCTGCATTC ATGTCTCCCG CCTGCTGGGC
GGCGACCCGG CCATGGTGCT CCACGGCGGC GGCAACACCT CGGTCAAGCT GGTGGAAAAA
GACCTTTTCG GCAAGGAGCT GCGGGTTCTT TGTATAAAAG GCAGCGGCGT GGACATGGCC
CATATTGAGC CGGAGGGGTT TGCCGCCATG GACCTGGCGG CCCTTGAGCC AATACAGGGC
ATCAGGGCCT TAAGTGACGA AGAGATGGAA AACCAGCTCT CCCGTCACCG GCTGAATGTC
AGGGCCCCTG CCCCTTCGGT GGAAACCTTT CTGCACGCCT TTCTGCCCCA CCGGTTTGTC
AATCACACCC ATGCCGATGC CGTGCTCGGC CTGACCAACC GCAGGCAGGC AAAAACCGTG
GTCCGCCAGG TCCTCGGCCC GGACGTCTGC GTGGTGGCCT ATGAGAAGTC AGGCCTGCCC
CTGGCCCGGC ACGTGGCCGC GGCATGGGAA AAGCAGCCGG CTGCCGACAC CGTGGTGGTG
CTGAATCACG GCATCTTCAC CTTTTCCGAT GACGCGAAAA CCGCCTGCAA CCGAATGTTG
GAACATGTCC GCAAGGCCGA AGCATGGCTG GCGGCCCATC AGCCAACGGC CGTGCCCGAG
ACCATGGCGG CCCCGCCGGG CGCCGTTTGC GCCCGCGTGG TCCAGGTGAT CCGCGGTGCC
TGCGCCCATG TGGACAGGCA GGGGAAACCC ACCCGGCTTC TGGCCGATCT TCGCACCGAT
ACCGACCTGG TGGCCATCTC CCTGGACAGG TCGGCCCAAA AAATCTGCGC TTCCGGCGTG
CTGACACCGG ACCATGCCAT TCGAACCAAA AACCGGATCG CCTACCTGCC GTCAATTCCC
GACAGCGACG AGGTTTTAAA GGCCCTGGTC GACAAAACCG TGGCCGCCTA TGCCAAAGAG
TACCGCCGCT ACGTGGCGGC CCATGCCGAC AAAGCGGAAT GTCCTGAAAC AGACCCCCTG
CCCCGGGTGT TTCTGGTGGC CGGCCTGGGC CTGGTGGGGC TGGGCGTTAC CCGAAAGGCG
GCGACCGTGG CCGCGGACAT CGCGGCCCAC ACCATCCGGA TCAAGCACCG GTGCGGCATG
GACGCCTACC GGGCCATTGC ACCACAACAC GTATTTGACA TGGAGTTCTG GCCCTTTCAG
TTAAAGAAAG TGGCGCAACA CCCGGCCCTT CCCCTTGAGG GCCAGGTGGC CCTGGTCACC
GGCGCGGCCG GGGCCATCGG GTTCGGCGTG GCCGACCGGC TTTTGGCTGC CGGCGCCGTG
GTGGTGGCCG CTGACCTGGA CGAAACCGGC CTTGCCAATG TGTGCGACCT GCTTTCAGAA
CGTCACGGCA AAGACCGCGT GGAGAGCGTC TCCTTTGACG TCACCGACTA CGACCAGACC
GAACGGGCCT TTATGAAGGC CTGCCTGAAG ATGGGGGGTA TCGATATCGT GGTGCCCAAC
GCGGGCATCG CCCATGTGGC CACCATTGAG GATCTTGCTC CCGCCGCCTT CAACCGGGTG
GTGTCCGTCA ACCTTACCGG CACGTTCAAC ACCATCAAGG CCTCGGTCCC GATTTTCAAA
CGCCAGGGCA CCGGCGGCAA CATCATCGTG ATCAGCACCA AGAACGTGTT TGATCCGGGC
GCCGCTTTCG GGGCCTACAG CTCGGCCAAG GCCGGGGCCC ACCAGATCGC CAAGATCGCG
GCCATCGAGC TGGCACCCCT GGGGGTCCGC ACCAACATGG TCAACCCGGA CGCGGTGTTC
GGCGACGCGG CCGTGCCCTC CAAGCTGTGG GAGCTGATCG GGCCGGACCG GATGAAGGCC
CGGGGCCTGG ACCCGGAAGG ATTAAAAGAA TACTACCGCC AGCGCAACCT GCTCAAGGCA
ACAGTCACCG CTGAACACGT GGGCAACGTG GTGGTCTTTT TTGCCAGCGA GCTCTCCCCC
ACCACCGGCG CCAGCTTTCC GGTGGACGGG GGCAACGCCG CGGCATTCCC GAGATAG
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| Protein sequence | MKDGNMPTQY DKKAVHAILK ARPELSPDLA ACIHVSRLLG GDPAMVLHGG GNTSVKLVEK
DLFGKELRVL CIKGSGVDMA HIEPEGFAAM DLAALEPIQG IRALSDEEME NQLSRHRLNV
RAPAPSVETF LHAFLPHRFV NHTHADAVLG LTNRRQAKTV VRQVLGPDVC VVAYEKSGLP
LARHVAAAWE KQPAADTVVV LNHGIFTFSD DAKTACNRML EHVRKAEAWL AAHQPTAVPE
TMAAPPGAVC ARVVQVIRGA CAHVDRQGKP TRLLADLRTD TDLVAISLDR SAQKICASGV
LTPDHAIRTK NRIAYLPSIP DSDEVLKALV DKTVAAYAKE YRRYVAAHAD KAECPETDPL
PRVFLVAGLG LVGLGVTRKA ATVAADIAAH TIRIKHRCGM DAYRAIAPQH VFDMEFWPFQ
LKKVAQHPAL PLEGQVALVT GAAGAIGFGV ADRLLAAGAV VVAADLDETG LANVCDLLSE
RHGKDRVESV SFDVTDYDQT ERAFMKACLK MGGIDIVVPN AGIAHVATIE DLAPAAFNRV
VSVNLTGTFN TIKASVPIFK RQGTGGNIIV ISTKNVFDPG AAFGAYSSAK AGAHQIAKIA
AIELAPLGVR TNMVNPDAVF GDAAVPSKLW ELIGPDRMKA RGLDPEGLKE YYRQRNLLKA
TVTAEHVGNV VVFFASELSP TTGASFPVDG GNAAAFPR
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