Gene Dole_1633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1633 
Symbol 
ID5694470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1941931 
End bp1942458 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content60% 
IMG OID641264228 
Producthypothetical protein 
Protein accessionYP_001529514 
Protein GI158521644 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0638355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTTC ACATCATCAT CGACGGGTAC AACCTGATTC GCCAGTCTCC GGTGCTGAGC 
CGCATTGAGC AGGAGAATCT TCAGGCCGGC CGGGAGGCCC TGGTGGCCAG CCTTGTCTCC
TATAAACGGA TCAAGGCCCA TACCATCACC GTGGTGTTTG ACGGCACGGA CGCGCCTTCC
TACTATTCCC ACAGGGACCG GGTGGGCGGT ATTGACGTGC GGTTTTCCGG GCCGGGCCAG
ACCGCCGACA GCGTGATCCG GAAAATGGCG GCGGAAAAAC GGGAAAAGGC CCTGGTGGTC
AGCTCGGACC GGGGCATTAC CGATTTTGCC CAGTCCGCCG GTGCCGCCAT TATCGCGTCC
CGCGAATTTG AAGACCGCAT GGCCCAGGCC ATGATGATGG ATGCCGCCGG CATGGCAGAG
GAAGACGGGG CTTTTTCTCC CTGGTCCGGC ACCACGAAAA AAAAAGGCCC TGGTCACAGA
CTCTCCAAAA AGCAGAGGAA AAGCCGGACC AAGGCGGAAA AGCTGTGA
 
Protein sequence
MSLHIIIDGY NLIRQSPVLS RIEQENLQAG REALVASLVS YKRIKAHTIT VVFDGTDAPS 
YYSHRDRVGG IDVRFSGPGQ TADSVIRKMA AEKREKALVV SSDRGITDFA QSAGAAIIAS
REFEDRMAQA MMMDAAGMAE EDGAFSPWSG TTKKKGPGHR LSKKQRKSRT KAEKL