Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1633 |
Symbol | |
ID | 5694470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1941931 |
End bp | 1942458 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641264228 |
Product | hypothetical protein |
Protein accession | YP_001529514 |
Protein GI | 158521644 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0638355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTTC ACATCATCAT CGACGGGTAC AACCTGATTC GCCAGTCTCC GGTGCTGAGC CGCATTGAGC AGGAGAATCT TCAGGCCGGC CGGGAGGCCC TGGTGGCCAG CCTTGTCTCC TATAAACGGA TCAAGGCCCA TACCATCACC GTGGTGTTTG ACGGCACGGA CGCGCCTTCC TACTATTCCC ACAGGGACCG GGTGGGCGGT ATTGACGTGC GGTTTTCCGG GCCGGGCCAG ACCGCCGACA GCGTGATCCG GAAAATGGCG GCGGAAAAAC GGGAAAAGGC CCTGGTGGTC AGCTCGGACC GGGGCATTAC CGATTTTGCC CAGTCCGCCG GTGCCGCCAT TATCGCGTCC CGCGAATTTG AAGACCGCAT GGCCCAGGCC ATGATGATGG ATGCCGCCGG CATGGCAGAG GAAGACGGGG CTTTTTCTCC CTGGTCCGGC ACCACGAAAA AAAAAGGCCC TGGTCACAGA CTCTCCAAAA AGCAGAGGAA AAGCCGGACC AAGGCGGAAA AGCTGTGA
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Protein sequence | MSLHIIIDGY NLIRQSPVLS RIEQENLQAG REALVASLVS YKRIKAHTIT VVFDGTDAPS YYSHRDRVGG IDVRFSGPGQ TADSVIRKMA AEKREKALVV SSDRGITDFA QSAGAAIIAS REFEDRMAQA MMMDAAGMAE EDGAFSPWSG TTKKKGPGHR LSKKQRKSRT KAEKL
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