Gene Dole_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1528 
Symbol 
ID5694365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1822979 
End bp1823569 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID641264123 
ProductLemA family protein 
Protein accessionYP_001529409 
Protein GI158521539 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00267014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCAA TTCTTGTTTT TCTGGGTCTC ATTCTGGTGC TGATCATTGT TGTTGTAGGA 
CTCTACAACA ACCTGGTCAC GCTCCGTAAC CGTTTCAAGA ATGCCTTTGC CCAGATCGAC 
GTCCAGTTGA AGCGGCGTTA TGATCTGATT CCCAACCTGG TGGAGACCGC CAAAGGGTAC 
ATGAAACATG AACGGGAGGC CCTGGAAGCA GTGGTTCGGG CCAGAAGCAG CGCCATGAAC 
GCCAGCGACA GGGCCGCCAA GGCCCCTGGA GAACCCGCTG CCATGCAGGG GCTGGCCAGC 
GCCGAAGGGG CCCTGTCCGG AGCCCTGGGC CGCATCTTCG CCCTGGCGGA AAGTTATCCC 
GACCTGAAGG CCAACCAGAA CATGCTGGCC CTGCAGGAAG AGCTCACCTC AACGGAAAAC 
CGGATCGCCT TTGCCCGGCA GGCCTTTAAC GACGCGGTGA CCAGCTACAA CATCGGTCGT 
GAAAAATTTC CCAACAACAT CGTGGCCAAC ATGTTTAATT TCGCGCCGGC CGAGCTCCTG 
GAATCCACCG AGGCACCGGA AGAGAGAAAA GCGCCCAGAG TCTCCTTTTA A
 
Protein sequence
MIPILVFLGL ILVLIIVVVG LYNNLVTLRN RFKNAFAQID VQLKRRYDLI PNLVETAKGY 
MKHEREALEA VVRARSSAMN ASDRAAKAPG EPAAMQGLAS AEGALSGALG RIFALAESYP 
DLKANQNMLA LQEELTSTEN RIAFARQAFN DAVTSYNIGR EKFPNNIVAN MFNFAPAELL 
ESTEAPEERK APRVSF