Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1060 |
Symbol | |
ID | 5693895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1252647 |
End bp | 1253612 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641263657 |
Product | peptidase M23B |
Protein accession | YP_001528947 |
Protein GI | 158521077 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.114471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGACC ACATGGCGCG AAAAAGGAAA ACCATTACGT TTTCAATTTT TGATGAAACC GCCTACAGCA GCAGACAATA CACTTTTTCG CATGCAGCCC TTATTTCCGT CGGTGTTGTG CTGCTGATCG GTGTGGCACT GTTTGCCTCC CTGTTTGTTC AGGGTGTTGT TCTTCGCCAC ACCGCCACCG ACTCCGTATG GCTTGAAAAT AAAATTACCG GTCAGCAACA GCAGATCGAT ATGAGAAATC AACAGATCGC CCTGCTGGAG AGCAAGCTGA CCTCCCTGAC CGGTGCCCTG TCCCATCTGG AGGCCATTGA AAGTGACATT CGCCGGATCG CACGAATCGA ACGGACGGCC AATCATGAAA ACCTGTTCGG CGTTGGCGGC TCCAAGTCCG AAACCACACC GGGCGCCTCT GAAAACGATA TCGGCGGCAG CGAAGCGCCG GCTGACCAGG ATAAGCAGGG AACAAAGGAT CCGGCAGGCA TCTTTTACGC GGCCAAGCAG AACCGGCTGA CACTGGTACT GGACCACTCC GATTTCATCA TGAACCCCAT GACCTGCCTT CCCCTGGCCA TGCCGGCTGA GGGAGATGTA ACCCACTGTT TTTTTTCCCG CCCGTCACCT TCCGATGGTC ATTCGGGCAG CAGGGGGGTT GAGATCGTCA TGCCCGGCCC CGCCGAAGTG GTGGCGTCCG CCAACGGCAT CGTGACGTAT GCCGGAGAGC GAAAACCTTT CGGCCATATG GTGGTCATCG ACCACGGCCA TGGATTCACC ACCCGGTACA CGCAGCTGAC AGCCGTGGCG CAAAAACCCG GCAGCACCGT TAAAAAAGAC GAGCCCATCG GCTTTGTCGA TAATCCCGGC AACGGAACTC CGGCCCGTGT CTTCTATGAA GTGCTCTTTA ACGGCGTTCA GGTAAATCCC GATATATGCC TCTCCGCCCG TCTCTTCTCC ATTTAA
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Protein sequence | MRDHMARKRK TITFSIFDET AYSSRQYTFS HAALISVGVV LLIGVALFAS LFVQGVVLRH TATDSVWLEN KITGQQQQID MRNQQIALLE SKLTSLTGAL SHLEAIESDI RRIARIERTA NHENLFGVGG SKSETTPGAS ENDIGGSEAP ADQDKQGTKD PAGIFYAAKQ NRLTLVLDHS DFIMNPMTCL PLAMPAEGDV THCFFSRPSP SDGHSGSRGV EIVMPGPAEV VASANGIVTY AGERKPFGHM VVIDHGHGFT TRYTQLTAVA QKPGSTVKKD EPIGFVDNPG NGTPARVFYE VLFNGVQVNP DICLSARLFS I
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