| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0409 |
|---|
| Symbol | |
|---|
| ID | 5693228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 470225 |
|---|
| End bp | 471601 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641262990 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001528296 |
|---|
| Protein GI | 158520426 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGATA TCCTTCGCGA TTCGTTTGCC GTTGCCGGTG AAGCCGAGGC CGTGTATGCC
AGGGCATGGG ACCGCGCCGC CTCGGTGAAC GCGGCCATTC GATCGGCCCC GCGCTTTACC
CGCCTTTTCA GCGATCTTGT CCGCATCGTG GCAAGCTATC GTATCCATTC TGTAAAATCC
CGGTTTTTAT CCGATGCCGA GGCAGCGCAG GCCCTTGAAG CGCTGCATCA GAAAAACGCC
CGACGGATTT ATGACCTTTG CGTGGAGATG CGCGGCGGCC TGATCAAGAT CGGCCAGTTT
GCCTCCACCT ACACAAACGC CCTGCCCCCT GCCTACATCG AATACCTTGG CCGTCTTCAG
GACCGGGTGC CGCCTGTCCC CTATAAAGCC ATTGCCCGGC GGATCGAGTC TGAATTCGGC
CGGCCGGCGG AACAGGTGTT TGCCCGGGTC GACCCTGAAC CCATCGCGGC GGCCTCCCTG
GCCCAGGTCC ACCCGGCCGA ACTGCACGAC GGCACCCGTG TGGTGATCAA AGTGCAGATG
CCTGATATTG AGAACACGGC GGAAATCGAT CTGACCGCCT TTACCATTGC CGCGGACCTC
ACCAACGACC TGTTTCCGGC CCTGGGCCTT TCTGAAATCA GCCGGGCCCT GGCAGACTCG
GTGAAAAAGG AGCTTGACTA CCGCCAGGAG CTGGCCAACA TTCTCAGGTT CAACAGGCAG
ACCGTGGATG ATCCGCGCGT GGTCGCCCCC AAAGTCTACC CCGGGCTTTC CACCCAGCGC
ATTCTGACCA TGGAAAAACT GGAAGGCGAG CACCTGATTC CTTTTCTGGA AGCCGCCGCT
CCTGACCGAA GAAATCGGCT GCTGGCCCTG ATCGCCGAAA GTTTTTGCAG CCAGATCGTG
ACCCACGGTT TTTTTCATGC CGACCCCCAT CCGGGTAACA TGTTCGTGCT GCCCGGTGAC
CGGCTGGGCC TTATAGACTT CGGCTGCGTG GAGCATTTTT CAGCCGGGAC CTACGCCCTG
TATATGGAAA TGATCTCCGC CATTCTGTCC CGGGACGCGG AGAGCATGGC CCGACTGTTT
GAAAGCATGG GGTTTTCCGC CGGCGCCGGG GCAGGGGCGC CCCTGCGGGA AATGGCAACG
GACTTTATCG AGCTTCTGAT GCTCGACCCG GACCAGAGCC TGGCCGACGT GGACACAACG
CAAAAACTCA CCAGGGGGCT GGAGCTGATC AAAAAATATC CCGGCATTCG GGTGCCCCGC
CATTTTGTCC TTCTGGGCCG GGTCCTGCTG ACTCTGGGCG GCATCATGAT GCGCTACAAC
CCGGATATCA ATGTTTTCAT GCTCATGGTG GATCAGATGG GCAAAAACAA ATTGTAA
|
|---|
| Protein sequence | MGDILRDSFA VAGEAEAVYA RAWDRAASVN AAIRSAPRFT RLFSDLVRIV ASYRIHSVKS
RFLSDAEAAQ ALEALHQKNA RRIYDLCVEM RGGLIKIGQF ASTYTNALPP AYIEYLGRLQ
DRVPPVPYKA IARRIESEFG RPAEQVFARV DPEPIAAASL AQVHPAELHD GTRVVIKVQM
PDIENTAEID LTAFTIAADL TNDLFPALGL SEISRALADS VKKELDYRQE LANILRFNRQ
TVDDPRVVAP KVYPGLSTQR ILTMEKLEGE HLIPFLEAAA PDRRNRLLAL IAESFCSQIV
THGFFHADPH PGNMFVLPGD RLGLIDFGCV EHFSAGTYAL YMEMISAILS RDAESMARLF
ESMGFSAGAG AGAPLREMAT DFIELLMLDP DQSLADVDTT QKLTRGLELI KKYPGIRVPR
HFVLLGRVLL TLGGIMMRYN PDINVFMLMV DQMGKNKL
|
|---|
| |