| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0235 |
|---|
| Symbol | |
|---|
| ID | 5693053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 258905 |
|---|
| End bp | 259720 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641262815 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001528122 |
|---|
| Protein GI | 158520252 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCAT CTGGCGCACA GATTCTGGTC GGCACCTGCG GGTATTCCTA TCCGGAGTGG
AAAGACGCCG GCTTTTATGC CGAAGACACA CCCTCCGGGA AAATGCTGGA AGCCTATGCC
CGGCGGTTTT CCGTAACTGA GCTGAATTAT ACCTGGTATC AGATGCCCAA GGCCCCGGCG
GTGGAGCGCA TGTGCCGGAA TGTACCGGAG ACCTTCCGGT TTGCCGCCAA GCTGAACCGC
AAGCTGACCC ATGAAGTGGA GCCCAACCAG TGGCGGCAGG AAGCCGCACA ATACCGGGCG
GGCATATCGC CCCTGGTGCA GTCCAACCAG TTGGCCGCCG TGCTGGTCCA GTTTCCCCCC
TCGTTTCAGC GCACGCCGGC CAACAGATCA TACCTGGCCG CCCTGCTGGA TGAAATGGGC
GACCTTCCCC TGGCCGTGGA GTTCCGGCAT GTCTCCTGGG CAACAGACAA GGTATATGCC
GCGTTTACCG AAAAAAAAGT CACCCTGGTG GCGGTGGATG TGCCGGACCT GGCCTGGCTC
TATCCCTCGG TGGATGTGGT GACCAACCCG GACCTGTTTT ATGTCCGGTT TCACGGCAGA
AACGCCAAAG GGTGGAACGC CGGCAGCATG CAGCAGCAGT TTGACTATGA TTATACCGCC
GCAGAACTGT CCCCCTGGGC CGACCAGCGC ATTCCGCGGA TGGCCGCGCA GGCAGGGGCC
GGCCTGGTGT TTTTCAATAA CCATGTCCGG GCCCAGGCGC CGAACAACGC GCTCCAGCTT
ATTCAGATGC TGATACGGCA GGGCCTGTTT CAATGA
|
|---|
| Protein sequence | MVASGAQILV GTCGYSYPEW KDAGFYAEDT PSGKMLEAYA RRFSVTELNY TWYQMPKAPA
VERMCRNVPE TFRFAAKLNR KLTHEVEPNQ WRQEAAQYRA GISPLVQSNQ LAAVLVQFPP
SFQRTPANRS YLAALLDEMG DLPLAVEFRH VSWATDKVYA AFTEKKVTLV AVDVPDLAWL
YPSVDVVTNP DLFYVRFHGR NAKGWNAGSM QQQFDYDYTA AELSPWADQR IPRMAAQAGA
GLVFFNNHVR AQAPNNALQL IQMLIRQGLF Q
|
|---|
| |