| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0115 |
|---|
| Symbol | |
|---|
| ID | 5692930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 127402 |
|---|
| End bp | 128238 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641262692 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001528002 |
|---|
| Protein GI | 158520132 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTTA AAAGATTTCC TGAAAAACGG ATTCTGATCA CCGGCGCCGG TTCCGGGTTC
GGCCGGGCCC TGGCCCTGGA GTTTGCAAAA CTGGGGTGGC GCATCGGCGT TGCCGAAATC
AACGCGGAGC GGGCCGCCGA GTCGGCCGAA CTGATCCGGC AGGCCGGGGG CCGGCCCGTG
GAAATTCTCT GCGATGTCAC CAAGCCCGAA GACCTGGATG CCGCCGCGGC CCTGGTGCAA
AAAGAGTGGG GCGGGCTGGA CATTCTGGTC AACAATGCCG GCGTGGCTGC CGCCGGTCTG
GTGGAAAAGA CCCCTCTGGA GACCTGGGAC TGGATTCTGG CGTTAAACAC CAAAAGCATT
ATTCTGGGGT GCCGCTCCTT TATTCCCATG CTCAAGGCCC AGAAGTCCGG CTATATCGTG
AACATGGCCT CAGCTGCCGG CATCTCTTCC CTGCCGGAGA TGGGGTGCTA CAACATCACC
AAGGCCGCGG CCATCTCCCT TTCCGAAACA CTGCGCGGTG AGCTGGCGCC CTTTAATATC
GGTGTGTCGG TGATCTGCCC CTCTTTTTTT AAAACCAACC TCATGGACCA GTTTACATCC
CCGGACGAGC GCCAGCGCAA AATGGCGGCC GCTTTTTTCA AAAAATCCAG GGTCACGGCA
GACCAGATCG CCCGGCACGT GGTCAAATCC GTGGATAAAA AAAGATTTTA TATAATCACC
CAGAAAGACG CCCGGGTCAT GTGGTATGCC AAGCGGTTTT TTCCGGAAAC CTATTTTCGG
ATCGCGGCCA GCATCTATAA AAAGAACCTG ATGGACAAGT ACCTGGGGGT TTCGTGA
|
|---|
| Protein sequence | MSLKRFPEKR ILITGAGSGF GRALALEFAK LGWRIGVAEI NAERAAESAE LIRQAGGRPV
EILCDVTKPE DLDAAAALVQ KEWGGLDILV NNAGVAAAGL VEKTPLETWD WILALNTKSI
ILGCRSFIPM LKAQKSGYIV NMASAAGISS LPEMGCYNIT KAAAISLSET LRGELAPFNI
GVSVICPSFF KTNLMDQFTS PDERQRKMAA AFFKKSRVTA DQIARHVVKS VDKKRFYIIT
QKDARVMWYA KRFFPETYFR IAASIYKKNL MDKYLGVS
|
|---|
| |