Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_963 |
Symbol | |
ID | 8657895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 896534 |
End bp | 897406 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | ABC transporter, ATP-binding/permease protein |
Protein accession | YP_003330410 |
Protein GI | 270308352 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0350052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTCCA TGGTATTTGT CATGATGCCC AGAGCTACCG TATCCGCCCA ACGCATTGCA GAGGTACTGG AAACTGAACC AGGCATTAAA GACCCTCAAA ACCCCATAAG CTTTGATACC GATACCAAAG GCAAAGTGGA ATTTCAAAAG GTAGGTTTTA AATACCCCGG TGCAGATGAT TATGTTTTGA AGGATATTTC TTTTGCGACC AAACTCGGGC AAACTACCGC CATTGTAGGC GGCACAGGAA GCGGCAAATC AACTCTGGTT AATCTCATTC CCCGTTTTTA CGATATAACA GAAGGCCAGA TTTTGATAGA TAACACTGAC ATACGCAGTG TCACCCAGTA TGCCTTGCGG GATAAAATCG GATACATCCC CCAAAAAGCC GGCTTATTCT CCGGCACTAT AGAGAGCAAT ATAGGATATG GAAATGAAAA TGCGGATGAA GATTTACTAA AGAAAGCCGC CCGGATTGCC CAGCTGACAG AATATATTGA CACTGCTGAA AACAGCCTCC AAACACCTAT CTCGCAGGGA GGGGCAAATA TATCCGGCGG TCAAAAACAA AGGATGGCTA TTGCCAGAGC CGTAGCCAAG CAACCAGAAA TATATATCTT TGATGACAGC TTCTCCGCCA TTGATTTCAA GACAGATGCG GCTCTGAGAA AAGCCCTCAA AAAAGAGACT CACAATGCTA CGGTCTTGAT TGTAGCCCAA AGGATAAATA CCGTTATGCA TGCCGAGCAG ATTATCGTGC TGGACAACGG GCGGATTGCC GGAAAAGGCA CCCACAAAGA GCTGATGGAA AACTGCACGG TATACCGCGA ATTGGCCCTC TCACAGCTGT CCATGGAGGA GTTATCAGCA TGA
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Protein sequence | MVSMVFVMMP RATVSAQRIA EVLETEPGIK DPQNPISFDT DTKGKVEFQK VGFKYPGADD YVLKDISFAT KLGQTTAIVG GTGSGKSTLV NLIPRFYDIT EGQILIDNTD IRSVTQYALR DKIGYIPQKA GLFSGTIESN IGYGNENADE DLLKKAARIA QLTEYIDTAE NSLQTPISQG GANISGGQKQ RMAIARAVAK QPEIYIFDDS FSAIDFKTDA ALRKALKKET HNATVLIVAQ RINTVMHAEQ IIVLDNGRIA GKGTHKELME NCTVYRELAL SQLSMEELSA
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