| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_877 |
|---|
| Symbol | |
|---|
| ID | 8657809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 811981 |
|---|
| End bp | 813012 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | permease |
|---|
| Protein accession | YP_003330329 |
|---|
| Protein GI | 270308271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA TTATCAATCT GCTGGCGGGT GGTTTTTCTG CCCTGTTTGA ATATCTTTCA
GCCCATGTTA TAGCCTGTCT GGTGCCGGCA TTTTTTATTG CCGGGGCTAT TTCAGCATTT
TTGAATCCGT CTATAGTAAC CAAATATTTC GGCAGTAACG TAAACCCCTT TGTATCATAC
AGTATAGCCT CTGTATCCGG GTTTATACTG GCAGTATGTT CCTGTACGGT TTTACCCCTG
TTTGCCGGCA TTTATAAACG CGGCGGGGGT ATCGGCCCGG CAGTCACTTT CCTGTATTCA
GGCCCTGCCA TAAGCATTTT GGCGGTTTCC TTGTCTGCCG GAGTACTAGG CTATGACATC
GGCTTTGCCA GGGCTGCCTT TGCCATCATA TTTTCTATAC TAATAGGTCT TATCATGGCC
TACCTTTTCA GCAAAGATAA ACCCGCTGTT TCCCAGCCGT CAGCCGCACT GCCTGCAGAT
ACAGCCCATG AACGCCCCAT GTACCAAACC CTTATTTATT TTGGCAGCCT TATCGCCATA
CTTATATTCG CATCCGCCAA TAATATACCC ACATTTCTGC TTGCTCTTTT AGTATTGCTG
TTCAGCCTTT GGCGGTTTTT CAATATGCCG CAGATAAAAG AATGGCTTTC TGAAACTTGG
CGTTTTGTAA AGCTGATTTC CCCATGGCTG ATAGGCGGTA TCTTTATAGC CGGGGTTTTG
AAAACCCTTA TCCCTACTGA TTTTATCACC AGTTACGTGG GCAGCAATAA CCCCATTTCA
AACTTGATTG CTTCACTCTC AGGTGCTCTG CTATATTTTG CCACCCTGAC CGAAGTACCC
ATAGTCAAAG CTTTTATTGA TTTGGGTATG GCTAAAGGCC CGGCACTGGC TTTGCTGCTG
TCAGGGCCGG CTGTCTCTCT CCCCAGTTTT TTAGTTATCC GCAAAATATT GGGCAATAAA
AAGGCATTTT CCTATATAGG GTTGGTGATA CTAAGTTCAA GTTTAGCCGG GTTTATATTT
GGGATATTTT AA
|
|---|
| Protein sequence | MDFIINLLAG GFSALFEYLS AHVIACLVPA FFIAGAISAF LNPSIVTKYF GSNVNPFVSY
SIASVSGFIL AVCSCTVLPL FAGIYKRGGG IGPAVTFLYS GPAISILAVS LSAGVLGYDI
GFARAAFAII FSILIGLIMA YLFSKDKPAV SQPSAALPAD TAHERPMYQT LIYFGSLIAI
LIFASANNIP TFLLALLVLL FSLWRFFNMP QIKEWLSETW RFVKLISPWL IGGIFIAGVL
KTLIPTDFIT SYVGSNNPIS NLIASLSGAL LYFATLTEVP IVKAFIDLGM AKGPALALLL
SGPAVSLPSF LVIRKILGNK KAFSYIGLVI LSSSLAGFIF GIF
|
|---|
| |