Gene DhcVS_511 details

Gene Information

• Locus tag: DhcVS_511
• Symbol: radC1
• ID: 8657451
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 479243
• End bp: 479929
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 50%
• Product: DNA repair protein RadC
• Protein accession: YP_003329993
• Protein GI: 270307935

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.000324187
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTCTCG TTCCTAGCAT ACGTGATTTG CCGCTTGCCG AAAAGCCCAG AGAACGGCTT 
CAGTCTCTGG GGGCCGGAGT GTTTTCTTCT GCTGAACTGC TGGCGGTTAT TTTGGGGCGG 
GGTGTGACGG GTGAGCCTGT GCTGCAAAGT GCTCAGCGTT TGCTTGCCCA TTTCGGCGGG 
CCGTCAGGTA TAGCTTCTGC CTCGGTGGAG GAACTTTCAA AACTGAAAGG AATAGGTCTG 
GCAAAGGCCT GCCAGCTGAA GGCCGCTTTT GAACTGGCTA AACGGGCAAG GGGGATTAAA 
GGCGAATACC AGCCCTGTAT CAAGACCCCG GAAGATGTTT TTCAAATAAT ATACCCGCTG 
GTATCGGACG AGAAAAAAGA ATATTTTTTC TGTTTGATGC TGGATGTAAA AAGCAGGCTT 
ATCAAGGTGG GGCATATATC TGCCGGCAGT TTAGATGAGA GTGTGGTTCA TCCCCGCGAG 
GTTTTCAAAG AAGCGCTATC CGCTAGTGCC GCAACTGTAA TACTGGCACA CAACCATCCT 
TCCGGAGATA CCGAGCCATC TCCAGATGAT ATCGGTTTGT CTGCCCGTTT GCGAGAGGCT 
GGCAGCATAA TGGGGATAGA GGTACTTGAC CATATCATAA TAGGCGGACA AAGCTTTACC 
AGTTTAAAAA GACAGGGGCT TTTATAA 

 

Protein sequence

MSLVPSIRDL PLAEKPRERL QSLGAGVFSS AELLAVILGR GVTGEPVLQS AQRLLAHFGG 
PSGIASASVE ELSKLKGIGL AKACQLKAAF ELAKRARGIK GEYQPCIKTP EDVFQIIYPL 
VSDEKKEYFF CLMLDVKSRL IKVGHISAGS LDESVVHPRE VFKEALSASA ATVILAHNHP 
SGDTEPSPDD IGLSARLREA GSIMGIEVLD HIIIGGQSFT SLKRQGLL