Gene DhcVS_240 details

Gene Information

• Locus tag: DhcVS_240
• Symbol: xerD2
• ID: 8657184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 227265
• End bp: 227960
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 51%
• Product: site-specific recombinase, phage integrase family
• Protein accession: YP_003329730
• Protein GI: 270307672

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAGCCT ACCTTGAGCC TGATGAAGTC GAGAAACTTG AACGAGCGGC GGATTTCTTA 
CGGGATAAGC TGCTCATCAG GCTTTTATGG CGGCTTGGCT GCCGTGTCAG CGAGGTGCTG 
GGAATAACTG TGGATAATAT CGACTTCAAG CAGGGCACAA TAACCATCGA ACACCTGAAA 
GCAAGGATCA AGCTTTCTTG CCCGAGTTGT GGTGCTGGCC TGGGTAAATC GCATAAGTTC 
TGCCCAGTAT GCGGACTGAA AGTTGAAAAG GCTGTTGCCC AGGAGAAAGA GCACCATCGC 
TACCGCTGTC TGCCGGTAGA TAAAGATACT CTTGATTTGT TGAAGGAATA CATCAAGCGA 
GGCGGCGCCG TTTCCAGAAA CGGTAAGAAG ATCGTCTTTA ACCTGACCCG GCACCGCGCC 
TGGCAAATAA TCAGGAAATG TTCCGATATA GCCGGATTGC CGCAGGTCGT CAATGCTGAA 
AGCGGAAAAG AGCATGGCGT CAGTCCTCAT AAACTGCGAG ACGCCTTCGC AGTCCATGCG 
GTAAAGCTGG ATGATTCTGG AGACGGTCTC AGGCTGTTGC AGGAACATCT GGGACACCAG 
AGCATTGTCA CTACCATGAA ATACCGCAAG GTGTCCGGTG AAGAGCAAAA AGAGTGGTAC 
GACAAGTTGT GGCAAGGAGG GAACAAGAAT GGGTAA 

 

Protein sequence

MKAYLEPDEV EKLERAADFL RDKLLIRLLW RLGCRVSEVL GITVDNIDFK QGTITIEHLK 
ARIKLSCPSC GAGLGKSHKF CPVCGLKVEK AVAQEKEHHR YRCLPVDKDT LDLLKEYIKR 
GGAVSRNGKK IVFNLTRHRA WQIIRKCSDI AGLPQVVNAE SGKEHGVSPH KLRDAFAVHA 
VKLDDSGDGL RLLQEHLGHQ SIVTTMKYRK VSGEEQKEWY DKLWQGGNKN G