| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1366 |
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| Symbol | rdhD |
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| ID | 8658291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1263760 |
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| End bp | 1264734 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | |
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| Product | probable regulatory protein, LuxR domain protein |
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| Protein accession | YP_003330793 |
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| Protein GI | 270308735 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATCTTC AAGAGAACAA TAATTCTCCG GTGGTTTACC CTGCATCGGG CAAGACTCAG
GATACTGGTT CTTGTTTGAA GCCGATTCCG CTACCCATTG AAGGTCAAAC TGATGAAGTT
GAAATAGCTC TGCGGGAGCG GGTTAAAGAA CTGAACTGCA TGTACGGCAT TTTTCAGCTG
GCGGAGCGCC ATCATTCCTC TTTAAACCGA TTCCTGTTTG AGCTTGTCAA TTTTCTGCCT
AATGCCTGGC AATATCCTGA TATCACCAAA GCTAAGATAG TTTTCAGAGG ACACCTCTTT
TTATCCACCG GTTTTAAAAT TAGCAATTGG TACCAATCCT CTCCAGTTTT GTTGAATGGT
GAACTGATGG GTGAGTGCAC TATTTACTAC ACCGAGGAGC GCCCGGTTGT TTACGAAGGC
CCATTCCTTA AAGAGGAACG GATTTTACTC AATAACGTAG CCGTGCAGAT TGGTAATATA
GCCGGACGTA TCGCCATAGA TGAGGAATTA GAGGAGATTA ACCGCCAGCT TAAACTTGAG
CGGCAGGCGT TGCAGGAAGC AAATATGGCT TTAAAAGTTA TTTTATCCAG GGGTGAAGCT
GCTCGGCAGG ATATATATAA TGATATCAAC CAGAACGTTG ATAAGATATT AAAACCCATT
CTCTTGTCAT TGGAGGCTCA ACTTCCTCCT TCACAGAAGA TCTATACCCA ACTGATTCTT
TCGAATTTGG AGGATATAAG CTCTTCCTTT GTGACAAACC TGTCTGGAGT TTGTAACTGT
CTGTCACCCG TAGAGATTGC TGTTTCCAAT ATGGTCAAGA ACGGGCTAAC TACAAAAGAA
ATTGCCAGTT TGCGGGGTGT TTCGCCTGCT ACCATAAACC GTCATCGTGA GAATATCAGG
CGCAAGTTTA AAATTGTCAA CCAAAGTGTC AATCTGTCGA CTTTTTTGCA GTCTAATCTG
AATATCTTGG AATAA
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| Protein sequence | MNLQENNNSP VVYPASGKTQ DTGSCLKPIP LPIEGQTDEV EIALRERVKE LNCMYGIFQL
AERHHSSLNR FLFELVNFLP NAWQYPDITK AKIVFRGHLF LSTGFKISNW YQSSPVLLNG
ELMGECTIYY TEERPVVYEG PFLKEERILL NNVAVQIGNI AGRIAIDEEL EEINRQLKLE
RQALQEANMA LKVILSRGEA ARQDIYNDIN QNVDKILKPI LLSLEAQLPP SQKIYTQLIL
SNLEDISSSF VTNLSGVCNC LSPVEIAVSN MVKNGLTTKE IASLRGVSPA TINRHRENIR
RKFKIVNQSV NLSTFLQSNL NILE
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