| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1185 |
|---|
| Symbol | |
|---|
| ID | 8658113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 1093982 |
|---|
| End bp | 1095511 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003330625 |
|---|
| Protein GI | 270308567 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00163792 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTACC TGAAACGGGT TACCATTTCC CTTATTCTGG CTCTGGGTCT TACCGCAGGG
CTTCTTCCCC AAACACCGCT TGCGGCTGCC TCCTCACATG AATACTGGGC GGTAGTAGTA
GGCATATCCG ATTACCAGAG AATTACAGAT GTAATAGGCC TGGCTAACGG CGCTCAGAAA
TTTGCTGATT CTCTCAAGGA AGCCTGGGGT GATGACCACG TAACGCTGCT GACCAACAGC
AACGCAGACA AACACTCTAT AAAGTCAGCC CTGGACTGGA TGATAAACCA GGAAGATGAC
AATGATACGG TGGTCTTTTT CTTTGCCGGA CACGGCGACA GCCATTCATA TATAGCCCCT
TATGATGCTT ATTACGCCTC GGAGTGGATT TCCAGCCAGG AGCTTTCAAA CTGGCTTTTG
CCGCTGGAGT CTCACTATCA GGCTGTGATA CTGGAATCCT GCTACTCAGC CAGCTTTGCA
GATGATTTAA ACCAGCCAGG GCGTATAATC CTGTATTCTT CACTTGCTGC GGAAGTTTCC
TGGGCGGATG GAGACAGCGG GCTTTTTTCC GGATATATAA ATGACGGACT AAGCTATATA
CCCAATGCAG ATATAAACGG CGATAACATC ATATCTCTGG AAGAGCTTTT TTACTACGCC
CAGCCACGTA CTACAGACGA ATCCCGAATA ACTTCCTCTC TTCAGCACCC GTTCCTGTCG
GATGGAATAG GCGGAGAGCT CAGCCTTATC GGCAAACTAC TATTAACGAT TTCCATACCT
ATATCAGGCA ACTATAACTA TCTGATAGTA GACGGCAGAA CCTATTCACT CAGCACCACA
CAGTTTAACT TTACCCCTGG CACAACTCAA GAAGTTACCG CTTTAAATAT AGAAACCCTT
CCTGGTATCC GTTATTTCTT TAAAAACTGG GCGGACGGAA TTACTTCAGC CAACCGCTCA
TTTACCAGCG GTGCAAACCT GCAAGCGGTT TATTCGCGCC AGTATCTTTT AACCATAGAC
TCCCCTACTT CAGCGGTTAC CGGCGGTGGC TGGTATGACC AAAACACATT TGCCAATCTT
TCCGCCCCGA ATATTGAAGA GGGCGGCATA CGCTATATAT TTACCGGCTG GAGCGGAGAT
ATTACCGGGC CTTTTGAAAG CACCCGCCTT GTGATGGATA AACCAAAGAC AGTCAAAGCC
AATTACGACA CCGAATACCG GCTTTTGCTA TCTTCACCCT ATGGCACACC TGACGGCGGA
GGATGGTATG CCGCAGGCAG CGCTGTAAAG CTAAGTGCAC CCTCAGCACA AGGGTTTTTA
ATCCGCCAGG TATTTGAAAG CTGGAGCGGG GATTACACCG GTACAGATGC AAGTGCAGTC
ATCACCCTTA GCAAACCAAT GAACATAACC GCCAATTTCA AAGCAGACTA TACTTTCCTG
TATATTGCCG TTGGATTAGG GGCAGTCATA ATTATCTGGC TGATACTGGC AATATCCAAA
CGCCGCAAGA ACTATTACAA TACTATCTGA
|
|---|
| Protein sequence | MHYLKRVTIS LILALGLTAG LLPQTPLAAA SSHEYWAVVV GISDYQRITD VIGLANGAQK
FADSLKEAWG DDHVTLLTNS NADKHSIKSA LDWMINQEDD NDTVVFFFAG HGDSHSYIAP
YDAYYASEWI SSQELSNWLL PLESHYQAVI LESCYSASFA DDLNQPGRII LYSSLAAEVS
WADGDSGLFS GYINDGLSYI PNADINGDNI ISLEELFYYA QPRTTDESRI TSSLQHPFLS
DGIGGELSLI GKLLLTISIP ISGNYNYLIV DGRTYSLSTT QFNFTPGTTQ EVTALNIETL
PGIRYFFKNW ADGITSANRS FTSGANLQAV YSRQYLLTID SPTSAVTGGG WYDQNTFANL
SAPNIEEGGI RYIFTGWSGD ITGPFESTRL VMDKPKTVKA NYDTEYRLLL SSPYGTPDGG
GWYAAGSAVK LSAPSAQGFL IRQVFESWSG DYTGTDASAV ITLSKPMNIT ANFKADYTFL
YIAVGLGAVI IIWLILAISK RRKNYYNTI
|
|---|
| |