Gene DhcVS_1122 details

Gene Information

• Locus tag: DhcVS_1122
• ID: 8658051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1034891
• End bp: 1035586
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 47%
• Product: ABC transporter, permease protein
• Protein accession: YP_003330564
• Protein GI: 270308506

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAATA TACTAACCGT AGCTAAAAAA GAAATGCGGG ATAATTTCAG CAACAGGGGT 
ATGCTTATTC AGGCACTTAT CATGCCCTTG TTGTTTGGTT TCCTTTATTC CAACAACCTG 
TCCAATCAGC CGGGCTTGGG TTTATCCATT AACGGAGTGG TTTTTTACCT GTCCATTATG 
ATAAGTGCCT TTATGTCTTA TATGTTTCTC AGCCAGGCAT TCGTAATGGA AAAATACACC 
CGCACTATTG AAAGCCTGAT GTGCACCCCG CTCAGCCTGC GGGATATTCT GCTGGGTAAA 
GTGCTGGGGG TAAGTGCCTC CACCTACCCG TTTGTCCTGC TGGCCGTCTT GATACCCATT 
ATCCGTACCG GGCTTGAAAA CGGGGAGTTT ATACTGCCCT CGCTGGCGAT ATTTGTGCAG 
GTGCTGTTTG TGACCCCGCT GGTTATTCTG GGTTTTGTAA ACCTGATGGG CTTTTTAAAC 
CTGTATGTGG GGCTGAAAGA GTACCGCATT TTAAACCTTA TAGTTTTTGT GCCCATGTTC 
GGGCTGATGG GTGCGGGTAT AGGTCTTGCC AGCAATATTG ATGCCCAGTG GACTTTGGTG 
GGCATAGTAG CCGGAGCGGC AATATTGATT CTGGGTATTT CTACTTACCT GACCCGTTTC 
CTCAGCCGGG AAAGGATAGT AACCACCCTG CCTTAA 

 

Protein sequence

MQNILTVAKK EMRDNFSNRG MLIQALIMPL LFGFLYSNNL SNQPGLGLSI NGVVFYLSIM 
ISAFMSYMFL SQAFVMEKYT RTIESLMCTP LSLRDILLGK VLGVSASTYP FVLLAVLIPI 
IRTGLENGEF ILPSLAIFVQ VLFVTPLVIL GFVNLMGFLN LYVGLKEYRI LNLIVFVPMF 
GLMGAGIGLA SNIDAQWTLV GIVAGAAILI LGISTYLTRF LSRERIVTTL P