| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4876 |
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| Symbol | |
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| ID | 7261905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5199701 |
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| End bp | 5200951 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564786 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002461306 |
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| Protein GI | 219670871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000066198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTAA AAAACTTACC TTTTAATCAA GAGCAGTTGC AGAAGATCAT GGAGGACTAT
GGTACCCCTT TTCATATTTA TGATGAGGAA GCCATTCGCA AAAACGCCCA AAGACTGCAG
GCAGCATTTG CCTGGGCGCC GGGGTTTAAG GAGTATTTTG CCGTCAAAGC TCTTCCTAAT
CCCTATATTC TGAAGATCCT GGGGGAAGAG GGTTTCGGAG CCGACTGCAG TTCTTTGGCG
GAACTGATCC TGGCGGAAAA AGCGGGGATC ACCGAGGAGA ACATTATGCT TACCTCCAAC
AATACCCCTG CTGAGGAATT TCAAAAAGCA AAGGATTTAT GGGCGATCAT CAATTTAGAT
GATATTACCC ATATTGATTA TCTGGAAAAG CATACCGGCC TGCCGGAGGT GCTCTCCTTC
CGCTATAATC CCGGTTCGCT GCGGGCGGGG AATGCCATTA TCGGCAACCC CGAAGAATCC
AAATATGGTT TGACCAAGGA ACAGTTATTC CAGGCTTACG AGATCGTTCG TGACAAAGGG
GTGAAGCGTT TCGGACTCCA TACTATGATC ATCTCCAATG AACTGAACCC GGATTTCTTC
ATCGAGACAG CAGAGATGAT GTTTGATCTG GCCATAGAGC TGAAAGAAAA ACTGGGAATC
CGCCTGGAAT TTGTGAATTT TGGCGGCGGA ATCGGCATCC CCTACCGTCC GGAACAAGAG
CCGGTCAATC TGGAAACTAT CGGAGAAGGT GTCCGCAAAG TTTACGAAGA GAAGATCGTC
GCCAAAGGCT TAGATCCCCT GCGCATCTGC CTGGAATGCG GCCGCATGAT AACGGGACCT
TACGGCTATT TGGTGACCAA AGTCCTTCAT CGCAAGGATA CGTATAAAAA TTATATCGGT
GTCGATGCCA GCATGTCCGA TCTGATGCGC CCGGGAATCT ACGGCGCCTA TCACCATATC
ACCGTCATGG GTAAGGAAGA CCTGCCTGAG GACCACATCT ATGATGTGAC CGGAAGCTTA
TGTGAGAACA ACGATAAATT TGCCGTGGAC CGGGAACTGC CCAGAATCGA GATCGGGGAT
ACTCTGGTGA TTCATGATAC AGGTGCTCAC GGGCATGCCA TGGGCTTCAA CTACAATGGC
AAGCTGCGTC ATGCTGAGTT ATTGCTGCAG GCTGATGGCA GTGTGAAGCT GATCCGCCGG
GCGGAAACAC TGGAGGATTA TTTTGCCACC TTGGATTTCA GTGAGCTATA G
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| Protein sequence | MAVKNLPFNQ EQLQKIMEDY GTPFHIYDEE AIRKNAQRLQ AAFAWAPGFK EYFAVKALPN
PYILKILGEE GFGADCSSLA ELILAEKAGI TEENIMLTSN NTPAEEFQKA KDLWAIINLD
DITHIDYLEK HTGLPEVLSF RYNPGSLRAG NAIIGNPEES KYGLTKEQLF QAYEIVRDKG
VKRFGLHTMI ISNELNPDFF IETAEMMFDL AIELKEKLGI RLEFVNFGGG IGIPYRPEQE
PVNLETIGEG VRKVYEEKIV AKGLDPLRIC LECGRMITGP YGYLVTKVLH RKDTYKNYIG
VDASMSDLMR PGIYGAYHHI TVMGKEDLPE DHIYDVTGSL CENNDKFAVD RELPRIEIGD
TLVIHDTGAH GHAMGFNYNG KLRHAELLLQ ADGSVKLIRR AETLEDYFAT LDFSEL
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