Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3903 |
Symbol | |
ID | 7260924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 4137808 |
End bp | 4138485 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643563827 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002460355 |
Protein GI | 219669920 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000000947161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTGATTCCGT ATTGCAATCA ATGCCTCTCT TTAAAAATAT CCAACCGGAT AAATATACTA ATGTTCTTTC CTGTCTGAAC GGACGTATTC AGGACTATGC CAAAGGTGAG ATCATCTATA GCCTGCAAGA TCCCCTGAAA AGTGCCGGCA TTGTTCTTGC CGGCCGGGTC AATATGTCCA TGGTCAGTGT GACCGGCACA GAGCATTATG TTCAGCAATT TGATCCGGGA GATATTTTCG GTGAAGCTTT GGCCTGCCAG GCTGATCCTA TGGACAACGG CGTATTGCAA ATAACGGCTG TCCAGAAAAG CAGCATCCTG TTTGTCTGTC TTTCCCATCT GTTTATGGAA AAGGCCCTGA CTTGCCCTTA TGCCTCTCAA GTGGCTTTAA ATCTGCTTAA AGAAGTGGTG GATAATAATA TCTTTCTGAG CAGAAAAGTG GAGATTTTAT CCCAGAAAAA GATCAGGGAC AGGATCTTCA TTTATTTGCA GTCTGTGGGC CGCTCCGGAA ATACGGTGAA TATCCCTTTC AACCGCCAGG AGTTGGCTAA TTTTCTGGGG GTGGACCGCA GCGCCCTCTC CCGGGAGCTT TGCCTGATGC GGGATGAAGG GATGATCGAC TTTTACAAAA ATGAGATCAT TCTTTTAAGA AATGATCTCA TTTCCTGA
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Protein sequence | MKKIDSVLQS MPLFKNIQPD KYTNVLSCLN GRIQDYAKGE IIYSLQDPLK SAGIVLAGRV NMSMVSVTGT EHYVQQFDPG DIFGEALACQ ADPMDNGVLQ ITAVQKSSIL FVCLSHLFME KALTCPYASQ VALNLLKEVV DNNIFLSRKV EILSQKKIRD RIFIYLQSVG RSGNTVNIPF NRQELANFLG VDRSALSREL CLMRDEGMID FYKNEIILLR NDLIS
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