| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3195 |
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| Symbol | |
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| ID | 7260211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3415818 |
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| End bp | 3419399 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643563118 |
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| Product | putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme |
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| Protein accession | YP_002459651 |
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| Protein GI | 219669216 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATTGG CTTATCATAA TTCTCACGAT CCCTTCTTCC GCAGCCCCTT TGGGGCTGTT
CCATGCGGCG GCCTGCTGCG CTTAAGACTG CTTATGCAGC CGGAGGATTC TTCTGGTGCG
GGCAGTCCGG TTCAGGAATG CTTTTTGCGC TTATGGGTGC AGGACCGGGA GGAGCGGCTG
CCCATGCTCA GGGTGGAAGA GCCGATCCTG TGGGAGATAA ATAGGGAAGG AACTGTTACA
GGGGAAGAGG CTATTACAGG GGAAGGGGTC CTTACGGGAG AAGGAGTCGT TTATGAGGTG
GAATATCCTC TTCCCCATGA ACCGGGAATC ATCTGGTATT ACTTTATTTT CAGGGCAGGG
GGAGAAACCT GTTTCTATGG CAATAATCAG GAAGAACTGG GAGGCGTGGG TGAGCTTCGA
TCCTCCGAGC CTCCCGGTTA TCAAATCACC GTTTACCGGC CCATGGCCTT GCCAGGCTGG
TACACCCAGG GCATCATGTA TCAGATCTAT GTGGATCGCT TCTTTAACGG GGATGAACAG
GGAAAAGTCC TCAATCCCCG CCCCCGCTCC CTGATCCATG GGGACTGGTC TGATACCCCC
TTCTATATTA AAAATGAAAA GGGCGAAGTC CTACGCTGGG ATTTTTTCGG CGGCAACCTT
GCCGGTGTGA TCAAAAAGCT TCCTTATCTT AAGGAATTAG GAGTGAGTAT CCTTTATTTG
AACCCCATCT TCGATTCCTC CAGCAACCAT AAGTATGACA CGGGGGATTA TCTCACTCTT
GATCCCATGT ATGGGGACGA GGAGATCTTT GCCCAATTGA TCAAGGAAGC CCAAAGCTTA
GGAATCGCGA TTATTCTGGA TGGGGTGTTC AGTCATACCG GTGATGACAG TATTTATTTT
AACCGTTATG GGAGATATCC TGGTCTGGGC GCCTATCAAT CCCCGGATTC CCCCTATTAC
TCCTGGTATC AATGTCATGG GGAAGGACAG GAAAAAGAAT ATTCCTGCTG GTGGGGAGTG
TCCACTCTCC CTGAAGTTTG GGAGATGGAG CCCTCTTATC GCGAGTTTAT CATTCACTCT
CCTCAAGGAG TTCTCCAATC CTGGATGAAA CGGGGTATTA AAGGCTGGCG TCTGGACGTG
GCTGACGAGC TTCCCGATGA ATTTATCCAG GAGTTCCGCC AAATGATGAA AACAATGGAC
CCTGAGGGAG TCCTGATCGG TGAAGTCTGG GAGGACCCCA CCCATAAATT CAGCTATGGC
AAGCTCAGGC AGTATTTCTG GGGGGAAGAA CTGGATGCCA CCATGAATTA TCCTTTGCGG
AATATCTTTC TCCAGTACTT CCTTGGGCAG ATCGATGCCG GTCAGGCCCA TAAACGCATC
ATGAATCTCT ATGAAAACTA CCCCCGGGAA AACTTTTTCG GGCAGATGAA CTTGATCGGC
AGCCATGACC GGGCCCGGAT TCTCACCCTC CTCGGTGAAG CGCCGCCGCC GGAGCAGCTC
TCCGCCGTGG AACAGGAGCA GTATCGCTTG CCTGCCCCTG CCCGGGATCT GGCTGTCCAG
CGGTTGAAAC TGCTGACTTT GCTGCAGATG AGCTTTCCCG GTGTTCCCTG TCTGTACTAC
GGTGATGAAG CGGGCTGTGA AGGATATCCC GATCCCTATA ACCGGGGGAC CTACCCTTGG
GGAAGGGAAG ATCAGGAGAT CCTCCAATGG TTTAAACGGG TGCTTCGTTA TCGCCGGGAA
TATGAGGTGC TGCGGCAAGG CGAGTTCTCT TCCTGGTTCG AGGGAAAAGA GATCTATGTC
TTGCAAAGGA AGGGTGAAAA AGAGGAGATT ATTGTCCTGG TTAATCGCAG TGCTGAGGAG
TCCACGGAAA TGACATTGAA GCTGGAGCAG AACGTGGGGC AGGTGATCGA TATCTTTGCG
GGGGAAGTGC TGCACAGTCT TTCGCTTATC CTACCCCCCT TATCCGCAAA GGCCCTTTTC
TATCAGAAAT ATGAGCGTGG TCACTATTTT AAACAGGAGA TCATGACCCG TGCCTGCGGC
ATCCTTATGC ATATCTCCTC TTTGCCGTCT CCCTGGGGCA TTGGCGATCT GGGGGAAGAG
GCCTATGCTT TTGTGGATTT CCTGGCTGAA GGAGGGCAAA GCCTCTGGCA GGTGCTGCCT
TTGAACCCTC TAGGGCTGGG AGATTCCCCT TACCAAAGTG AGTCCGCCTT AGCCGGTAAT
TTTTTGCTGA TCAGTCTTGA TTTGCTTATT GAGGCCGGGC TGCTGACCGA AGGGGAGGCC
CGCAGGGAAT GGGCCGACTA TGGTCAAGAG GTTAAAAAGA CTGAGGGAAG CGAAGGAAGC
GAAGGAAGCG AAGGAAGCGA AGGAAGCGAA GGCCTCGGGA GCGAGGGCTT TGCCTGGGTG
GAACGCTATA AGGAGAAGCT GCTGCGCAAG GCTTATGAAC GTTTCAAGGA GAAATTGCCC
AGGTACCCTT TGGATTTAAG CAGTCCGGAG GGAGGCAGCC AGCCTGGAAC TAAGGGGTAC
TTGGACCCTC AGGGTTATGA CCGGTTTATA GAAGAGAATC AGGACTGGCT GCAAGACTAC
GCTCTCTATA AGTGTTTAAA GCTTAAGTTC CCCGGCAAGG CGTGGCACCA ATGGGAAGAA
AGCTATCGCT TGCGGAAGCC TGAGGCCCTG GAGGCTGTGA CTGAAGATTA TGCCGAGGAG
ATAAACTATA TTTTCTTTGT TCAATATACT TTCGCTGATC AGTGGCAAAG GCTGAAGGAC
TATGCTCAGG AAAAAGGGGT AAAAATAATC GGCGATCTGC CCATTTATGT GGCCTATGAC
AGTTGCGACA CCTGGGCTAA CCGGGAGTGC TTTGCTCTGG ATGAAAATAA TGCTCCCGCA
GGAACCGCTG GGGTGCCCCC CGACTATTTC AACCCTGAAG GGCAGAACTG GGGAAATCCC
TTATACGATT GGGATGCTCT CCGGGCCGCC GATTATGCCT GGTGGAAGCT GCGTTTCCGG
CAAGGGCTGG AGCGCTTTGA TGCCTTAAGA CTGGATCATT TCCGTGGCTT TGAGGGCTAT
TGGGAAGTTC CCCCTCAGGC CGGGAGCGCC AAGGAAGGCC GCTGGCTGAA AGGGCCGGGG
AAAGAATTTT TCGAAAGCCT GGTCCGTGAA TTGGGGCCTC TGCCCGTCAT CGCTGAGGAT
TTAGGGTGCA TTACCCCTGA AGTCAATACC CTGAGAGCTA TTTTAGGATT TCCGGGGATG
AGGGTGACGC AGTTTTCACC CTTGCAGCAA GAAGGGAATT ATGTTGATTA TTCCGGAACC
CATGATAACG ATACCCTGTT GGGCTGGTAT CGCTCCCAAG GCTATAGCGA TAAGGATTCC
CTGGCGCAAG TGGAAAGGAC TATCGAGGAG CTTTATCAGG GGAATGGTAT CTGGGTCATT
TTCCCCCTTC AGGACATTCT TAAACTGGAT TCCCGGGCGA GGATGAATAC TCCCGGCACA
ATTAAAGGGA ATTGGCAGTG GCGTGTAGAA AGAGGAACCT TAACTCAGGA GGTTTGTGCG
CGATTAAGGG GTTTGGCGGA AAAGTATGGG CGGTTATCCT GA
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| Protein sequence | MVLAYHNSHD PFFRSPFGAV PCGGLLRLRL LMQPEDSSGA GSPVQECFLR LWVQDREERL
PMLRVEEPIL WEINREGTVT GEEAITGEGV LTGEGVVYEV EYPLPHEPGI IWYYFIFRAG
GETCFYGNNQ EELGGVGELR SSEPPGYQIT VYRPMALPGW YTQGIMYQIY VDRFFNGDEQ
GKVLNPRPRS LIHGDWSDTP FYIKNEKGEV LRWDFFGGNL AGVIKKLPYL KELGVSILYL
NPIFDSSSNH KYDTGDYLTL DPMYGDEEIF AQLIKEAQSL GIAIILDGVF SHTGDDSIYF
NRYGRYPGLG AYQSPDSPYY SWYQCHGEGQ EKEYSCWWGV STLPEVWEME PSYREFIIHS
PQGVLQSWMK RGIKGWRLDV ADELPDEFIQ EFRQMMKTMD PEGVLIGEVW EDPTHKFSYG
KLRQYFWGEE LDATMNYPLR NIFLQYFLGQ IDAGQAHKRI MNLYENYPRE NFFGQMNLIG
SHDRARILTL LGEAPPPEQL SAVEQEQYRL PAPARDLAVQ RLKLLTLLQM SFPGVPCLYY
GDEAGCEGYP DPYNRGTYPW GREDQEILQW FKRVLRYRRE YEVLRQGEFS SWFEGKEIYV
LQRKGEKEEI IVLVNRSAEE STEMTLKLEQ NVGQVIDIFA GEVLHSLSLI LPPLSAKALF
YQKYERGHYF KQEIMTRACG ILMHISSLPS PWGIGDLGEE AYAFVDFLAE GGQSLWQVLP
LNPLGLGDSP YQSESALAGN FLLISLDLLI EAGLLTEGEA RREWADYGQE VKKTEGSEGS
EGSEGSEGSE GLGSEGFAWV ERYKEKLLRK AYERFKEKLP RYPLDLSSPE GGSQPGTKGY
LDPQGYDRFI EENQDWLQDY ALYKCLKLKF PGKAWHQWEE SYRLRKPEAL EAVTEDYAEE
INYIFFVQYT FADQWQRLKD YAQEKGVKII GDLPIYVAYD SCDTWANREC FALDENNAPA
GTAGVPPDYF NPEGQNWGNP LYDWDALRAA DYAWWKLRFR QGLERFDALR LDHFRGFEGY
WEVPPQAGSA KEGRWLKGPG KEFFESLVRE LGPLPVIAED LGCITPEVNT LRAILGFPGM
RVTQFSPLQQ EGNYVDYSGT HDNDTLLGWY RSQGYSDKDS LAQVERTIEE LYQGNGIWVI
FPLQDILKLD SRARMNTPGT IKGNWQWRVE RGTLTQEVCA RLRGLAEKYG RLS
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