Gene Dhaf_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2001 
Symbol 
ID7258970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2153627 
End bp2154487 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID643561894 
ProductABC transporter related 
Protein accessionYP_002458474 
Protein GI219668039 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTA AAGTAGAAGG TGCATTCTAT AAGTATCCGG GCGCTCCGCG GGATGTTATT 
CAGGACATCA GCTTCACAGT CAGGAAGGGA GAGATTTTTG GCTTTCTCGG TCCGTCGGGA
GCCGGCAAAA GTACTTTGCA AAAAATCCTC ACAGGAGTGT TGAGAGACTA TCAAGGCCGG
GTTCAGGTCT TAGGCACGGA AATGAAACAC CGTAAAAGTT CATTTTATGA AAGGATTGGC
GTGGATTTTG AATTCCCCAA TTTCTACGGT AAGTTTACAG CCCTGGAAAA CCTCCAGTAT
TTTGCCTCCC TTTACCATCA AAAAACCCTG GACCCGCTGA CCTTATTGGA GCAGGTGGGT
CTGCAGCATG ATGCCCATAA AAGAGTAGCC AGCTATTCCA AAGGGATGAA GATGCGTCTG
GGTTTTGTGC GCTGCCTGCT GCACAATCCC CAGCTGCTTT TTTTGGATGA ACCCACCAGC
GGTCTTGATC CTGCCAATGC CAGAATCTTA AAGGATATGA TGCTGGAGCA GAAAGCAGGG
GGAAAAACCA TCATTCTTAC GACCCATAAC ATGCATGATG CCGGGGAATT GTGCGATCGG
GTGGCGTTTA TTGTGGATGG TAAAATTAGA GCCCTGAATA CCCCCCAGGC TTTTCAGGTG
GATCGGAGCG GCAGTGCGGA GGTCAATTAT TCCTATAGAA GGGATGGCCG AACGGTGGAC
AGACGGAGCA CCCTCACCCA ACTGGGCCAG GATGATGAGT TTGTTAAGGC TTTGCAGAAC
GGTTCACTGC TAAGGATTCA CTCCAAAGAG CGGACCTTGG AGGAGGTTTT TATAGCTTTG
ACGGGGAGGC AGCTGCAATG A
 
Protein sequence
MMIKVEGAFY KYPGAPRDVI QDISFTVRKG EIFGFLGPSG AGKSTLQKIL TGVLRDYQGR 
VQVLGTEMKH RKSSFYERIG VDFEFPNFYG KFTALENLQY FASLYHQKTL DPLTLLEQVG
LQHDAHKRVA SYSKGMKMRL GFVRCLLHNP QLLFLDEPTS GLDPANARIL KDMMLEQKAG
GKTIILTTHN MHDAGELCDR VAFIVDGKIR ALNTPQAFQV DRSGSAEVNY SYRRDGRTVD
RRSTLTQLGQ DDEFVKALQN GSLLRIHSKE RTLEEVFIAL TGRQLQ