| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1658 |
|---|
| Symbol | |
|---|
| ID | 7258627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1770375 |
|---|
| End bp | 1772522 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643561560 |
|---|
| Product | FMN-binding domain protein |
|---|
| Protein accession | YP_002458140 |
|---|
| Protein GI | 219667705 |
|---|
| COG category | [C] Energy production and conversion
[S] Function unknown |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC ATTGCGGCAC ACTCTTGCTC TGCCTGCTGG CACTGAGTCT GGTACTGACC
GGCTGCTCCG GCTCCGGAGT TAAAACAGGA ACGAAAGCAG GAATTTATAC CCCTGGCACC
TATACTGCCC AGGCAGCGGG ATTCGGTGGC AAGGTCTCCG TCACCATGAC CTTTGATGCT
AATGCCATCA CCGACGTGAA GATTGAGGGA GCTGACGAGA CTCCCGCCGT CGGCGGCAAA
GCCATCGAAG GGTTTCCCGG AATGCTCATG GAGGCGCAGT CTGCCGACAT CGACGGCATA
AGCGGCGCCA GCTACACAAG CAAAGCGGTC CTGACCGCCG CCGCGAACTG CGTGGCCCAG
GCCAAAGGGG AGGATACCGA CCAGAAGACC CCTGTAGCCG ACGGTACTTA CAGCGGTCAG
GCTCCCGGCT TCAGCTGGAC CGGAATGATT AAGGCGGATG TGACGTTCAA GGATAATACC
ATCACGGACA TCAACATCGT GGAGGAGCAA GAGACTTACA CCGGCGAGAT TTTCTATACC
GTTCTTGACA ATTATATTCC CCGGATCCTG GAGGCCCAAT CTCTGGCGGT GGACGGCATC
AGTGGAGCCA CCCTCTCCTC CAATGGTGTG CGCGGCTGCG TGGAGCAGGC CATTGAGGCC
GCCGGCGGTA GGAGCTCTGA GTGGTATGGC GAGGTAGCTA GGTCCACCAA GATTGTGAAA
AAGGAGGGCT ACGATGTCAT TATCGTAGGC ATGGGCGGCT CCGGCATCAC CTCCTTCCTG
TCCGCTGCCC AGGCGGGGGC CAAGGTTTTC GGCATTGAGA CCACGGCTAA GCTGGGCGGA
CAGAGCGCCA CCACCAGCGG TCCCATGGCC GCAAACTCCC AGGTTAAGAT GGATGAGGAG
TTCGGCGGCA AAGAGTACAT CGACGCCGAC GCCCTTTACA AGGCCTGGAA GGACTATTGC
GGCGCCGACG CCAAGCCGGA GATGATCCGT ATGGCCATCG ACGAGTCTGG TGAGACCCTG
GATTGGATGA TCAAGGACTG GGGATTCCAG TTCTCCCCCA TGAGCAGCTT TATCCTCAGC
CCCTACCCTG ACTGGAAGAT TTGGTGCTAC TATGGCGGTG AAACCAAGAA CCGTTTCGGC
ACCAACAAGA CCTATATGTT CGAAAACGCG GTCAAAAAGG CCCAGGCTCA GAACCCTGCC
GCCGAATATA TGCTGGAGCT CACTGCTCAG GAACTGCTGA TGGACGGCGA CAAGGTGGCC
GGGGTGAAAG CCGTCTACCA CGACGGCACC ATTTATGAGA TCTATGGCAA GACCGTCATT
CTGGCCACCG GCGGCTTTAT TGGCAATGCT GACATGATGA AGGAATACCT GGACGGCCCG
GCCAACACTG TCGCCATGAC GGTGGACGAC GGCGACGGCA TCAAGCTCGG CCTCTCTGCC
GGCGGTGCGC TTATGAATCC CGATATTCCC CCTATGGTGC ACATCAACCA GGTGGCCAAT
CTTATCAAGA ACAACGATCT GGATGCCGAC GGCAAGCAGG TCCTCACCTC TCTGGCTATC
GCCACTGACG CTCTGGCTGT GGATGGGAAC GGGAAGCTGT GGAACACGAG AGAGGAGATC
TGCCTGGCCC CTCAATACCG GTACTATAAT ATCTACACTG CTGCTCAGAT CGAGGCGATC
AAGACCAAAG GCCTGGCCAA GGTCAATAAG TCCATGTTCA TGGATCAGGG TGGAACCGTG
GAGGCAGGCA AGCCCATCGC CAATATCGAT GAAATCCTCA AGGTGGGAGC CGGCTATAAG
AACGTCCTCA CTGCTGAAAG CGCCGAGGAT CTGGCCAAAG CCATCGGCTG CGACGCAGCG
ACTCTTAAGG ATAGCCTGAA CGGCGCTCAG GGACCCTACT ACGCAGTGAT CTGCTCAGGC
TACGCCTATG CTACCTGCGG CGGCTTGAAC GTGGACGACG CCATGAACGT GCTGCGGGCC
GACGGTTCTC CCATCGGGAA TCTCTACGCC GTGGGCCAGG ACTCCATGGG TGTTCTGTTC
TCCAGTGATG TTCCTTACAC CCCATACGGC GGTCAGGCCC AAAGCTGGGC GTTAACCTCC
GGCCGGCTGG CCGGTGCCAA CGCGGCTAAG TACGCTATGG GCAAATAA
|
|---|
| Protein sequence | MKKHCGTLLL CLLALSLVLT GCSGSGVKTG TKAGIYTPGT YTAQAAGFGG KVSVTMTFDA
NAITDVKIEG ADETPAVGGK AIEGFPGMLM EAQSADIDGI SGASYTSKAV LTAAANCVAQ
AKGEDTDQKT PVADGTYSGQ APGFSWTGMI KADVTFKDNT ITDINIVEEQ ETYTGEIFYT
VLDNYIPRIL EAQSLAVDGI SGATLSSNGV RGCVEQAIEA AGGRSSEWYG EVARSTKIVK
KEGYDVIIVG MGGSGITSFL SAAQAGAKVF GIETTAKLGG QSATTSGPMA ANSQVKMDEE
FGGKEYIDAD ALYKAWKDYC GADAKPEMIR MAIDESGETL DWMIKDWGFQ FSPMSSFILS
PYPDWKIWCY YGGETKNRFG TNKTYMFENA VKKAQAQNPA AEYMLELTAQ ELLMDGDKVA
GVKAVYHDGT IYEIYGKTVI LATGGFIGNA DMMKEYLDGP ANTVAMTVDD GDGIKLGLSA
GGALMNPDIP PMVHINQVAN LIKNNDLDAD GKQVLTSLAI ATDALAVDGN GKLWNTREEI
CLAPQYRYYN IYTAAQIEAI KTKGLAKVNK SMFMDQGGTV EAGKPIANID EILKVGAGYK
NVLTAESAED LAKAIGCDAA TLKDSLNGAQ GPYYAVICSG YAYATCGGLN VDDAMNVLRA
DGSPIGNLYA VGQDSMGVLF SSDVPYTPYG GQAQSWALTS GRLAGANAAK YAMGK
|
|---|
| |