| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1612 |
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| Symbol | |
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| ID | 7258581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1719727 |
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| End bp | 1720644 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643561516 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002458096 |
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| Protein GI | 219667661 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00244603 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGT ACGAAATGTA TTACTTTGCT TTCAACAAAT CATCGGAACC CATGTTATTT
GCCGATCCCA ATACAGGAAG GATCTTCGAT GTCAATCAAG CCTTTCTGGC TCTGCTGGGT
TATGCCAAGG ATGAAGTCAT GGTCAAAACA ACCTTTGATC TGGGATTATT GCCAGAAGAA
GACAGCCAGC CCCGCCAGCC CCTATGGGTT AAAACCAAAA ATGGCTCTTT AAAATCCGGG
ATGGTTTCAG CCACTGATTT AGTGCATAAG GAAAAAATGA TGCGCCTTAT GGTTTTTCAG
GAACAATCTG AGAACGGCAA CTTTACCCTT GAAGAAATGC TGACCCAAAC CATCAGCCTC
ATCTCCAAAA TCAGCGAATT TCGGGACCCC TATACTTCAG GGCACCAAAA AAGGACGCAA
AAACTGGCCT GTGCCATTGC CTCAGAGATG AAGCTTTCAG GGGAGGCGAT CCATCATGTT
TCTATGGCTG CTGCGATTCA TGATGTGGGA AAAATATATA TTAGCTCCGA TATTTTGAAC
AAACCAGGAA AGCTGACCCA ACTTGAGTAT CAGATGCTCC AAACCCATGT GGAAGTTGGT
TATGAAATTA TTAAAGATTT CCAGCTTCCT TGGCAGATCC CGGAAATCAT CAGCCAGCAC
CACGAGCGGT TGGATGGCTC AGGCTATCCC AAGGGCCTGA CCGCCTCACA GATCTTCCTT
GAAAGTAAAA TCCTCGCCGT GGCAGATGTT GTCGACGCTA TGAATTCACA CCGCCCTTAC
AGGCCGGCCC TCGGGATAGA GGCTGCCCTT GAGGAAATCT GCAATTATAA GGGTGAAAAA
TATGATTCTG AAGTTGTTGA GCATTGCGTG AGACTTTTTA AAGAAAAGCA AGCAATGCCC
AATCGCTTCA AAATATGA
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| Protein sequence | MELYEMYYFA FNKSSEPMLF ADPNTGRIFD VNQAFLALLG YAKDEVMVKT TFDLGLLPEE
DSQPRQPLWV KTKNGSLKSG MVSATDLVHK EKMMRLMVFQ EQSENGNFTL EEMLTQTISL
ISKISEFRDP YTSGHQKRTQ KLACAIASEM KLSGEAIHHV SMAAAIHDVG KIYISSDILN
KPGKLTQLEY QMLQTHVEVG YEIIKDFQLP WQIPEIISQH HERLDGSGYP KGLTASQIFL
ESKILAVADV VDAMNSHRPY RPALGIEAAL EEICNYKGEK YDSEVVEHCV RLFKEKQAMP
NRFKI
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