Gene Dhaf_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1404 
Symbol 
ID7258374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1510967 
End bp1511857 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID643561316 
Productprotein of unknown function DUF88 
Protein accessionYP_002457896 
Protein GI219667461 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.516072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCACTCC TGTCCTTTTC CTGCGTACTC TATAGTAAGG GAAAGTGGAA ATGGGGTGAC 
ATTGTTTTGA AGGCGATTGC TTTTATTGAT TATGAAAATA TATGGACTGG ACTCTTTGAA
CAAGGTTATG AATTAACTCC GGAAATCCTT ATGGAATCCA TTCAACTGTA TGCTAAACAA
AATGACTATG TTCTATCCGC TATTTATCTC TATGCTAATT TCGATCGGGA AGAATTCTGG
CGTGCCCAGA CTTCCTTTGA GAAGATTCAT GTATATACAC GCCATGTGTA CGGAAAAAAC
AATTTTGCCA GTACGGGATT AAGGCGAAAT GCGGCGGATG TGGAGCTCAT ATTGGAAGCG
CAGGAGATCT TGCTCACTCG TACCGCAACC TTTGATGTGT TTCTTCTGTT GACTGGGGAT
GGGGATTTTT TGCCTTTACT TCGAAAAGTA AGGGCCTGGG GAAAAGATGT TAAAGTTATC
GGCGTGAAGG GAAGCATGCA CCACGAACTT CAAGCCTTTA GTGATTCCGG AGATTTTTTC
GGCGAGTTTC TCCCTCAGGA GCGACCGCAG GAATATGAGC CTGAAAAGGA TCTTGAACAA
GCAATCTCAA TCATAGCTCA GCTTCAGCTA AGCATGACGT ATATTGCTTC CACCAAAGCG
AGGCTCACCC TGTCGGATCA TCTGGGAGTT ACCATATCCC AAGTGAAAGA GCTTATTCGC
TACGCATTAA GAGAGGGGAT TCTTCTTGAA CAAGAATATG CCGATTCCAG TTTAAAGATC
GGTAAAACCA AGGTCTATCT TTTGAACCTT GACCATTCTA TGGTTCAAGT TGTTCTGGGG
TCCGCAATCG AAGAGATTCG CAAACGCTAT GAGAAATTAA GAACTCATTG A
 
Protein sequence
MSLLSFSCVL YSKGKWKWGD IVLKAIAFID YENIWTGLFE QGYELTPEIL MESIQLYAKQ 
NDYVLSAIYL YANFDREEFW RAQTSFEKIH VYTRHVYGKN NFASTGLRRN AADVELILEA
QEILLTRTAT FDVFLLLTGD GDFLPLLRKV RAWGKDVKVI GVKGSMHHEL QAFSDSGDFF
GEFLPQERPQ EYEPEKDLEQ AISIIAQLQL SMTYIASTKA RLTLSDHLGV TISQVKELIR
YALREGILLE QEYADSSLKI GKTKVYLLNL DHSMVQVVLG SAIEEIRKRY EKLRTH