Gene Dhaf_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1233 
Symbol 
ID7258203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1328182 
End bp1328640 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content48% 
IMG OID643561146 
Productphage shock protein C, PspC 
Protein accessionYP_002457726 
Protein GI219667291 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.233266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AATTATACCG CTCAGAAACA GATAAAAAAG TGGGTGGAGT CTGCGGGGGA 
CTTGCGGATT ACTTTGATAT TGACTCTACC TTAATTCGTT TGGTTGTCCT CCTGACCTTC
TTCATGGGAG GTGTTGGCTT CTTCCTCTAT ATTATTGCCT GGGCGGTGAT CCCCGTCAAT
CCGGGCTATA GGGCAGGAGG AGGTTATCAC CATGGTGGGA CGGTGGTGGA TGAGATGAAA
GAAAGTGTTC AGGATATCGG CAGCTCTGCG CAAAGCTTCG CCCAGGACTT GAGGACAGCC
AACCCATCCC AGAGAAAGCG GTATATAGGA ATCGGCCTGA TGGTTCTGGG AGTCATTTTT
CTCCTGGATC AATGGTTTCC CCATTTCTTT GCCTGGGGGA AAATGTGGCC CCTCATTTTG
ATCATCATCG GTATTGGGAT TATCATAAGG AGGGATTAA
 
Protein sequence
MTDKLYRSET DKKVGGVCGG LADYFDIDST LIRLVVLLTF FMGGVGFFLY IIAWAVIPVN 
PGYRAGGGYH HGGTVVDEMK ESVQDIGSSA QSFAQDLRTA NPSQRKRYIG IGLMVLGVIF
LLDQWFPHFF AWGKMWPLIL IIIGIGIIIR RD