Gene Dhaf_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1056 
Symbol 
ID7258024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1150958 
End bp1151800 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content51% 
IMG OID643560970 
ProductRadical SAM domain protein 
Protein accessionYP_002457552 
Protein GI219667117 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR01290] nitrogenase cofactor biosynthesis protein NifB 


Plasmid Coverage information

Num covering plasmid clones85 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAG CATGTACATG TACACAAGGA AATATGAATA CTCCCCGCCT GAATCTCGGA 
CATCCCTGTT TTTCCACCAA AGGACATGGC AATACGGGAC GCATCCATTT AGCCGTAGCT
CCCGGCTGCA ATATCTCGTG CAATTATTGT GTACGCAAAT TTGATTGTGC CAATGAATCC
CGTCCAGGTG TAGCCAGTAA GGTGCAAACC CCTGAAGAAG CACTGGCAAC GGTGCGGAAA
GTCAAAGCTT CCGGTAAAGG AGATAAATTT GTGGTGGTCG GCATTGCCGG TCCCGGGGAG
CCCTTAGCCA ATGAGGGGAC CTTTACAACG CTGAGAGGGG TAAAACGGGA TTTCCCGGAG
ATGATTCTGT GCCTGAGCAG CAATGGCCTG CTCTTGCCGG AGAAGATGGA GGAATTGACG
GATATCGGAG TATCTCACAT TACTATTACC ATCAATACCC TGGAGGAGCA GGTTGGTGCC
CAAATCTACA GTTATGTGCG CTGGAAGGGG CAAACCTTGA TCGGAGCTGA AGCGGCAAGA
ACCCTGCTCC ATAATCAGCT GAGCGGGCTG GAAATGGCCG CGAAGGCGGG GATGACAGTG
AAAATAAATA CGGTGCTGAT GCCTGGCATC AATGACCATG GCCTAAATGA CTTATCTGTG
GAAATCAAGA AAAGGGGAGC ACATCTTCAT AATATTATGC CGGTCATTCC CCAGGGGAAA
TTAGCTCATA TCATACCGCC CTCCCGGGAG CAGCTTGCCG TTAGACGCAG CAGTTTAAGC
TCCCTCCTGC CCCAGATGAC CCATTGTCAG CAATGCCGCG CCGATGCCAT CGGGGTGTTC
TGA
 
Protein sequence
MHKACTCTQG NMNTPRLNLG HPCFSTKGHG NTGRIHLAVA PGCNISCNYC VRKFDCANES 
RPGVASKVQT PEEALATVRK VKASGKGDKF VVVGIAGPGE PLANEGTFTT LRGVKRDFPE
MILCLSSNGL LLPEKMEELT DIGVSHITIT INTLEEQVGA QIYSYVRWKG QTLIGAEAAR
TLLHNQLSGL EMAAKAGMTV KINTVLMPGI NDHGLNDLSV EIKKRGAHLH NIMPVIPQGK
LAHIIPPSRE QLAVRRSSLS SLLPQMTHCQ QCRADAIGVF